| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2501809 = | 34 (0.680) | 3 (0.060) | 3/248 | NT | 8.5% | coding (248/1089 nt) | PP_2195 | putrescine‑binding protein |
| ? | NC_002947 | 2501860 = | 32 (0.660) | coding (299/1089 nt) | PP_2195 | putrescine‑binding protein | |||||
CCCAGCGTGCCCCAGGTGTACGGCACAGCATGGCGGTTGCCGGGGTCAACCTCGGCCAGTTTGCCCAGCAGGTCCTTGTCGAGGTTGCCATAACCAGGCATGGCCTGAGCGTCCAGCGGTTGCAGGGCATGGGCCTTGAGCGCTCGGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2501959‑2501809‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaTGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACGCTGGGCCTGGGGGTAAATGTGGAGGCAGTACGCCAGCGCCTTGGCGATG > NC_002947/2501860‑2502003 CCCAGCGTGCCCCAGGTGTACGGCACAGCATGGCGGTTGCCGGGGTCAACCTCGGCCAGTTTGCCCAGCAGGTCCTTGTCGAGGTTGCCATAACCAGGCATGGCCTGAGCGTCCAGCGGTTGCAGGGCATGGGCCTTGAGCGCTCGGGC < 3:108936/149‑1CCCAGCGTGCCCCAGGTGTACGGCACAGCATGGCGGTTGCCGGGGTCAACCTCGGCCAGTTTGCCCAGCAGGTCCTTGTCGAGGTTGCCATAACCAGGCATGGCCTGAGCGTCCAGCGGTTGCAGGGCATGGGCCTTGAGCGCTCGGGC > 4:294264/1‑149 CAGGCATGGCCTGAGCGTCCAGCGGTTGCAGGGCATGGGCCTTGAGCGCTCGGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGG < 7:65843/108‑1 CAGGCATGGCCTGAGCGTCCAGCGGTTGCAGGGCATGGGCCTTGAGCGCTCGGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGG > 8:65843/1‑108 CATGGCCTGAGCGTCCAGCGGTTGCAGGGCATGGGCCTTGAGCGCTCGGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACGC > 6:59880/1‑149 GGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACGCTGGGCCTGGGGGTAAATGTGGAGGCAGTACGCCAGCGCCTTGGCGAT > 3:23876/1‑148 GGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACGCTGGGCCTGGGGGTAAATGTGGAGGCAGTACGCCAGCGCCTTGGCGAT < 4:23876/148‑1 GCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGAACACCTGGGGCACGCTGGGCCTGGGGGTAAATGTGGAGGCAGTACGCCAGCGCCTTGGCGATG > 7:88892/1‑148 CCCAGCGTGCCCCAGGTGTACGGCACAGCATGGCGGTTGCCGGGGTCAACCTCGGCCAGTTTGCCCAGCAGGTCCTTGTCGAGGTTGCCATAACCAGGCATGGCCTGAGCGTCCAGCGGTTGCAGGGCATGGGCCTTGAGCGCTCGGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2501959‑2501809‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaTGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACGCTGGGCCTGGGGGTAAATGTGGAGGCAGTACGCCAGCGCCTTGGCGATG > NC_002947/2501860‑2502003 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |