New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2501809 =	34 (0.680)	3 (0.060)	3/248	NT	8.5%	coding (248/1089 nt)	PP_2195	putrescine‑binding protein
	?	NC_002947	2501860 =	32 (0.660)					coding (299/1089 nt)	PP_2195	putrescine‑binding protein

CGTCGCCCCGCAAACCCTGCAGCGCTTCGAACAGGAAACGGGCTACAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACG  >  NC_002947/2501663‑2501954                                                                                                                                                    |                                                                                                                                                  cGTCGCCCCGCAAACCCTGCAGCGCTTCGAACAGGAAACGGGCTACAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGGCCGGAGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTg                                                                                                                                                  <  3:226521/148‑1 (MQ=255) cGTCGCCCCGCAAACCCTGCAGCGCTTCGAACAGGAAACGGGCTACAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTgg                                                                                                                                                 <  7:278462/149‑1 (MQ=255)  gTCGCCCCGCAAACCCTGCAGCGCTTCGAACAGGAAACGGGCTACAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGc                                                                                                                                                >  2:189604/1‑149 (MQ=255)    catcgccaaggcgctggcgtactgcctccacatttacccccaggcccagcgtgccccaggtgttcggcacagcatggcggttgccggggtcaacctcggccagtttgcccagcaggtccttgtcgaggttgccataaccaggcaTGGc                                                                                                                                                >  7:88892‑M1/145‑148 (MQ=255)     atcgccaaggcgctggcgtactgcctccacatttacccccaggcccagcgtgccccaggtgtacggcacagcatggcggttgccggggtcaacctcggccagtttgcccagcaggtccttgtcgaggttgccataaccaggcaTGGcc                                                                                                                                               <  4:23876‑M1/5‑1 (MQ=255)     atcgccaaggcgctggcgtactgcctccacatttacccccaggcccagcgtgccccaggtgtacggcacagcatggcggttgccggggtcaacctcggccagtttgcccagcaggtccttgtcgaggttgccataaccaggcaTGGcc                                                                                                                                               >  3:23876‑M1/144‑148 (MQ=255)      ccccGCAAACCCTGCAGCGCTTCGAACAGGAAACGGGCTACAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGccc                                                                                                                                              >  7:243633/1‑147 (MQ=255)        ccGCAAACCCTGCAGCGCTTCGAACAGGAAACGGGCTACAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAgc                                                                                                                                          >  8:87669/1‑149 (MQ=255)           cAAACCCTGCAGCGCTTCGAACAGGAAACGGGCTACAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCt                                                                                                                                       >  2:261340/1‑149 (MQ=255)                 cTGCAGCGCTTCGAACAGGAAACGGGCTACAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGc                                                                                                                                                >  8:139318/1‑134 (MQ=255)                 cTGCAGCGCTTCGAACAGGAAACGGGCTACAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGc                                                                                                                                                <  7:139318/134‑1 (MQ=255)                    cAGCGCTTCGAACAGGAAACGGGCTACAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCa                                                                                                                              >  2:308896/1‑149 (MQ=255)                     aGCGCTTCGAACAGGAAACGGGCTACAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCAt                                                                                                                             <  6:54952/149‑1 (MQ=255)                      gcgcTTCGAACAGGAAACGGGCTACAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATg                                                                                                                            <  1:179585/149‑1 (MQ=255)                            cGAACAGGAAACGGGCTACAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTg                                                                                                                       <  7:87669/148‑1 (MQ=255)                             gAACAGGAAACGGGCTACAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGc                                                                                                                      <  8:270998/148‑1 (MQ=255)                             gAACAGGAAACGGGCTACAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGc                                                                                                                      <  8:98150/148‑1 (MQ=255)                              aaCAGGAAACGGGCTACAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCaa                                                                                                                    >  4:192146/1‑149 (MQ=255)                                    aaaCGGGCTACAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTg                                                                                                              >  4:145668/1‑149 (MQ=255)                                     aaCGGGCTACAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTgg                                                                                                             <  8:243633/149‑1 (MQ=255)                                              cAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAgg                                                                                                    <  1:189604/149‑1 (MQ=255)                                              cAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAgg                                                                                                    <  2:151493/149‑1 (MQ=255)                                              cAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCAGTGGTAGCGGCTCTATTCGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCa                                                                                                      <  1:261340/148‑1 (MQ=255)                                               aaGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGc                                                                                                   <  4:230710/149‑1 (MQ=255)                                                  gTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCAt                                                                                                <  3:185275/149‑1 (MQ=255)                                                    gcgtgccccaggtgtacggcacagcatggcggttgccggggtcaacctcggccagtttgcccagcaggtccttgtcgaggttgccataaccaggcaTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATg                                                                                               >  6:59880‑M1/97‑149 (MQ=255)                                                            acacCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTAt                                                                                      <  1:308896/149‑1 (MQ=255)                                                                cTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGc                                                                                   >  2:279663/1‑148 (MQ=255)                                                                               aGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGAcc                                                                   >  2:308553/1‑149 (MQ=255)                                                                                   cTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACctgc                                                                <  1:308553/148‑1 (MQ=255)                                                                                     ggAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATgg                                                                                    >  4:24662/1‑126 (MQ=255)                                                                                     ggAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATgg                                                                                    <  3:24662/126‑1 (MQ=255)                                                                                            aaGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACt                                                      <  3:145668/149‑1 (MQ=255)                                                                                            aaGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACt                                                      >  8:121905/1‑149 (MQ=255)                                                                                                 gTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGcc                                                  >  5:322317/1‑148 (MQ=255)                                                                                                 cctcggccagtttgcccagcaggtccttgtcgaggttgccataaccaggcaTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTg                                                                                           >  8:65843‑M1/52‑108 (MQ=255)                                                                                                 cctcggccagtttgcccagcaggtccttgtcgaggttgccataaccaggcaTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTg                                                                                           <  7:65843‑M1/57‑1 (MQ=255)                                                                                                    gACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGAc                                                                    <  8:165763/127‑1 (MQ=255)                                                                                                    gACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGAc                                                                    >  7:165763/1‑127 (MQ=255)                                                                                                     aCCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGt                                             <  3:192146/149‑1 (MQ=255)                                                                                                                       cgacgTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGc                             >  1:227217/1‑148 (MQ=255)                                                                                                                                 gtgCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTTGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGcc                  <  7:126892/149‑1 (MQ=255)                                                                                                                                 gtgCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGcc                  <  6:322317/149‑1 (MQ=255)                                                                                                                                          tCCACCGTGCTGGCCCGAGAGCTCAAGGCCCATGCCCTGCAAACGCTGGACGCTCAGGCCATGCGTGGTTATGGCAACCTCGACAAGGACCTGCTGGGAAAACTGGCCGAGGTTGCCCCCGGCAACAGCCATGCTGTGCCGTACACGTg         >  6:228116/1‑149 (MQ=255)                                                                                                                                            cACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTgg        <  2:227217/148‑1 (MQ=255)                                                                                                                                                 tGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACg  >  5:266086/1‑149 (MQ=255)                                                                                                                                                  gCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTgg        <  1:280023/142‑1 (MQ=255)                                                                                                                                                  gCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTgg        >  2:280023/1‑142 (MQ=255)                                                                                                                                                    |                                                                                                                                                  CGTCGCCCCGCAAACCCTGCAGCGCTTCGAACAGGAAACGGGCTACAAGGTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCT‑ACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACG  >  NC_002947/2501663‑2501954

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.