New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2501809 =	34 (0.680)	3 (0.060)	3/248	NT	8.5%	coding (248/1089 nt)	PP_2195	putrescine‑binding protein
	?	NC_002947	2501860 =	32 (0.660)					coding (299/1089 nt)	PP_2195	putrescine‑binding protein

GTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCTACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACGCTGGGCCTGGGGGTAAATGTGGAGGCAGTACGCCAGCGCCTTGGCGATG  >  NC_002947/2501712‑2502003                                                                                                                                                     |                                                                                                                                                gTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCTACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCAt                                                                                                                                                 <  3:185275/149‑1 (MQ=255)  gcgtgccccaggtgtacggcacagcatggcggttgccggggtcaacctcggccagtttgcccagcaggtccttgtcgaggttgccataaccaggcaTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATg                                                                                                                                                >  6:59880‑M1/97‑149 (MQ=255)           acacCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCTACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTAt                                                                                                                                       <  1:308896/149‑1 (MQ=255)               cTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCTACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGc                                                                                                                                    >  2:279663/1‑148 (MQ=255)                              aGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCTACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGAcc                                                                                                                    >  2:308553/1‑149 (MQ=255)                                  cTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCTACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACctgc                                                                                                                 <  1:308553/148‑1 (MQ=255)                                    ggAAACCAAGCTGTTGACCGGTGGTAGCGGCTACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATgg                                                                                                                                     <  3:24662/126‑1 (MQ=255)                                    ggAAACCAAGCTGTTGACCGGTGGTAGCGGCTACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATgg                                                                                                                                     >  4:24662/1‑126 (MQ=255)                                           aaGCTGTTGACCGGTGGTAGCGGCTACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACt                                                                                                       >  8:121905/1‑149 (MQ=255)                                           aaGCTGTTGACCGGTGGTAGCGGCTACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACt                                                                                                       <  3:145668/149‑1 (MQ=255)                                               cctcggccagtttgcccagcaggtccttgtcgaggttgccataaccaggcaTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTg                                                                                                                                            <  7:65843‑M1/57‑1 (MQ=255)                                               cctcggccagtttgcccagcaggtccttgtcgaggttgccataaccaggcaTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTg                                                                                                                                            >  8:65843‑M1/52‑108 (MQ=255)                                                gTTGACCGGTGGTAGCGGCTACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGcc                                                                                                   >  5:322317/1‑148 (MQ=255)                                                   gACCGGTGGTAGCGGCTACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGAc                                                                                                                     <  8:165763/127‑1 (MQ=255)                                                   gACCGGTGGTAGCGGCTACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGAc                                                                                                                     >  7:165763/1‑127 (MQ=255)                                                    aCCGGTGGTAGCGGCTACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGt                                                                                              <  3:192146/149‑1 (MQ=255)                                                                     cgacgTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGc                                                                              >  1:227217/1‑148 (MQ=255)                                                                               gtgCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTTGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGcc                                                                   <  7:126892/149‑1 (MQ=255)                                                                               gtgCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGcc                                                                   <  6:322317/149‑1 (MQ=255)                                                                                        tCCACCGTGCTGGCCCGAGAGCTCAAGGCCCATGCCCTGCAAACGCTGGACGCTCAGGCCATGCGTGGTTATGGCAACCTCGACAAGGACCTGCTGGGAAAACTGGCCGAGGTTGCCCCCGGCAACAGCCATGCTGTGCCGTACACGTg                                                          >  6:228116/1‑149 (MQ=255)                                                                                          cACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTgg                                                         <  2:227217/148‑1 (MQ=255)                                                                                            caggcatggcctgagcgtccagcggttgcagggcatgggccttgagcgctcgggccaTGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAgg                                                                                               <  7:65843‑M2/51‑1 (MQ=255)                                                                                            caggcatggcctgagcgtccagcggttgcagggcatgggccttgagcgctcgggccaTGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAgg                                                                                               >  8:65843‑M2/58‑108 (MQ=255)                                                                                               tGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACg                                                   >  5:266086/1‑149 (MQ=255)                                                                                                gCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTgg                                                         >  2:280023/1‑142 (MQ=255)                                                                                                gCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTgg                                                         <  1:280023/142‑1 (MQ=255)                                                                                                catggcctgagcgtccagcggttgcagggcatgggccttgagcgctcgggccaTGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACGc                                                  >  6:59880‑M2/54‑149 (MQ=255)                                                                                                    GCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACGCTggg                                              <  3:108936‑M1/149‑1 (MQ=255)                                                                                                    GCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACGCTggg                                              >  4:294264‑M1/1‑149 (MQ=255)                                                                                                           cgcTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACGCTGGGCCTgggg                                       <  1:279663/149‑1 (MQ=255)                                                                                                              tCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGc                                                      <  4:17869/131‑1 (MQ=255)                                                                                                              tCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGc                                                      >  3:17869/1‑131 (MQ=255)                                                                                                              tCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACGCTGGGCCTGGGGGt                                     >  3:166305/1‑148 (MQ=255)                                                                                                                  ggCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCg                                                                                                                             >  2:231448/1‑56 (MQ=255)                                                                                                                  ggCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCg                                                                                                                             <  1:231448/56‑1 (MQ=255)                                                                                                                   gCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTaca                                                              >  4:92635/1‑118 (MQ=255)                                                                                                                   gCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTaca                                                              <  3:92635/118‑1 (MQ=255)                                                                                                                           ccTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACGCTg                                                >  6:106519/1‑124 (MQ=255)                                                                                                                           ccTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACGCTg                                                <  5:106519/124‑1 (MQ=255)                                                                                                                                        gACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACGCTGGGCCTGGGGGTAAATGTGGAGGCAGTACGCCAGCGCCt          >  4:129631/1‑149 (MQ=255)                                                                                                                                         aCGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACGCTGGGCCTGGGGGTAAATGTGGAGGCAGTACGCCAGCGCCtt         <  4:166305/149‑1 (MQ=255)                                                                                                                                            cTCAGGCCATGCCTGGGTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACGCTGGGCCTGGGGGTAAATGTGGAGGCAGTACGCCAGCGCCTTGGc      <  8:122910/149‑1 (MQ=255)                                                                                                                                                ggccaTGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACGCTGGGCCTGGGGGTAAATGTGGAGGCAGTACGCCAGCGCCTTGGCGAt   <  4:23876‑M2/143‑1 (MQ=255)                                                                                                                                                ggccaTGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACGCTGGGCCTGGGGGTAAATGTGGAGGCAGTACGCCAGCGCCTTGGCGAt   >  3:23876‑M2/6‑148 (MQ=255)                                                                                                                                                 gccaTGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGAACACCTGGGGCACGCTGGGCCTGGGGGTAAATGTGGAGGCAGTACGCCAGCGCCTTGGCGATg  >  7:88892‑M2/5‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                GTGCGGTACGACACCTTTGACACCCCCGAAGTGCTGGAAACCAAGCTGTTGACCGGTGGTAGCGGCTACGACGTGGTGGTGCCGTCATCCACCGTGCTGGCCCGAGCGCTCAAGGCCCATGCCCTGCAACCGCTGGACGCTCAGGCCATGCCTGGTTATGGCAACCTCGACAAGGACCTGCTGGGCAAACTGGCCGAGGTTGACCCCGGCAACCGCCATGCTGTGCCGTACACCTGGGGCACGCTGGGCCTGGGGGTAAATGTGGAGGCAGTACGCCAGCGCCTTGGCGATG  >  NC_002947/2501712‑2502003

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.