| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2619995 = | 40 (0.790) | 6 (0.120) | 4/246 | NT | 14.6% | coding (535/1689 nt) | PP_2293 | DNA maturase B |
| ? | NC_002947 | 2620031 = | 32 (0.670) | coding (571/1689 nt) | PP_2293 | DNA maturase B | |||||
TGCGGCACCTTCTGGAGTGTCGGATACAGCGCGGGCCACACACGGATTTCATAGCCGCGCTCGGGGAGCCGGTTGTACAAGGACATCTCGCACTGAGGCGTCCCCAGGTAAATGATGCGTGCCGACTGAAGCGGCTTGAGGATCGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2620143‑2619995‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcatcATTTACCTGGGGACGCCTCAGTGCGAGATGTCCTTGTACAACCGGCTCCCCGAGCGCGGCTATGAAATCCGTGTGTGGCCCGCGCTGTATCCGACACTCCAGAAGGTGCCGC > NC_002947/2620031‑2620142 TGCGGCACCTTCTGGAGTGTCCGATACAGCGCGGGCCACACACGGATTTCATAGCCGCGCTCGGGGAGCCGGTTGTACAAGGACATCTCGCACTGAGGCGTCCCCAGGTAAATGATGCGTGCCGACTGAAGCGGCTTGAGGATCGCATC < 3:16240/149‑1 AATGATGCGTGCCGACTGAAGCGGCTTGAGGATCGCATCATTTACCTGGGGACGCCTCAGTGCGAGATGTCCTTGTACAACCGGCTCCCCGAGCGCGGCTATGAAATCCGTGTGTGGCCCGCGCTGTATCCGACACTCCAGAAGGTGCC > 3:116512/1‑149 AATGATGCGTGCCGACTGAAGCGGCTTGAGGATCGCATCATTTACCTGGGGACGCCTCAGTGCGAGATGTCCTTGTACAACCGGCTCCCCGAGCGCGGCTATGAAATCCGTGTGTGGCCCGCGCTGTATCCGACACTCCAGAAGGTGCC > 3:121056/1‑149 TGATGCGTGCCGACTGAAGCGGCTTGAGGATCGCATCATTTACCTGGGGACGCCTCAGTGCGAGATGTCCTTGTACAACCGGCTCCCCGAGCGCGGCTATGAAATCCGTGTGTGGCCCGCGCTGTATCCGACACTCCAGAAGGTGCCGC < 4:116512/149‑1 TGATGCGTGCCGACTGAAGCGGCTTGAGGATCGCATCATTTACCTGGGGACGCCTCAGTGCGAGATGTCCTTGTACAACCGGCTCCCCGAGCGCGGCTATGAAATCCGTGTGTGGCCCGCGCTGTATCCGACACTCCAGAAGGTGCCGC < 4:121056/149‑1 GATGCGTGCCGACTGAAGCGGCTTGAGGATCGCATCATTTACCTGGGGACGCCTCAGTGCGAGATGTCCTTGTACAACCGGCTCCCCGTGCGCGGCTATGAAATCCGTGTGTG > 3:147778/1‑113 GATGCGTGCCGACTGAAGCGGCTTGAGGATCGCATCATTTACCTGGGGACGCCTCAGTGCGAGATGTCCTTGTACAACCGGCTCCCCGTGCGCGGCTATGAAATCCGTGTGTG < 4:147778/113‑1 TGCGGCACCTTCTGGAGTGTCGGATACAGCGCGGGCCACACACGGATTTCATAGCCGCGCTCGGGGAGCCGGTTGTACAAGGACATCTCGCACTGAGGCGTCCCCAGGTAAATGATGCGTGCCGACTGAAGCGGCTTGAGGATCGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2620143‑2619995‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcatcATTTACCTGGGGACGCCTCAGTGCGAGATGTCCTTGTACAACCGGCTCCCCGAGCGCGGCTATGAAATCCGTGTGTGGCCCGCGCTGTATCCGACACTCCAGAAGGTGCCGC > NC_002947/2620031‑2620142 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |