| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2807533 = | 41 (0.810) | 3 (0.060) | 3/244 | NT | 6.9% | coding (907/969 nt) | Nuh | ribonucleoside hydrolase |
| ? | NC_002947 | 2807569 = | 42 (0.880) | coding (943/969 nt) coding (211/213 nt) |
Nuh PP_2461 |
ribonucleoside hydrolase hypothetical protein |
|||||
CCATCGACCTGTTGGTGCGCGACAACGGTGCCGAGGCGGCACGCAGCTTCATCGACCAGGTGTTCGAGCGCTACGCGCCGCACGCGGCTATTCCAATCGCGCCAGACGGGCACTGAGCAGGTCGAACAGCCCCTGGGCATCACCCTGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2807682‑2807533‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgctcAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGATGGCGATCAGCAGCAACTCTTCCGGTGTGCCAGGG > NC_002947/2807569‑2807714 CCATCGACCTGTTGGTGCGCGACAACGGTGCCGAGGCGGCACGCAGCTTCATCGACCAGGTGTTCGAGCGCTACGCGCCGCACGCGGCTATTCCAATCGCGCCAGACGGGCACTGAGCAGGTCGAACAGCCCCTGGGCATCACCCTGCT > 1:239773/1‑149 ATCGACCTGTTGGTGCGCGACAACGGTGCCGAGGCGGCACGCAGCTTCATCGACCAGGTGTTCGAGCGCTACGCGCCGCACGCGGCTATTCCAATCGCGCCAGACGGGCACTGAGCAGGTCGAACAGCCCCTGGGCATCACCCTG > 3:228589/1‑145 ATCGACCTGTTGGTGCGCGACAACGGTGCCGAGGCGGCACGCAGCTTCATCGACCAGGTGTTCGAGCGCTACGCGCCGCACGCGGCTATTCCAATCGCGCCAGACGGGCACTGAGCAGGTCGAACAGCCCCTGGGCATCACCCTG < 4:228589/145‑1 GAGGCGGCACGCAGCTTCATCGACCAGGTGTTCGAGCGCTACGCGCCGCACGCGGCTATTCCAATCGCGCCAGACGGGCACTGAGCAGGTCGAACAGCCCCTGGGCATCACCCTGCTC > 1:317848/1‑118 GAGGCGGCACGCAGCTTCATCGACCAGGTGTTCGAGCGCTACGCGCCGCACGCGGCTATTCCAATCGCGCCAGACGGGCACTGAGCAGGTCGAACAGCCCCTGGGCATCACCCTGCTC < 2:317848/118‑1 GCACTGAGCAGGTCGAACAGCCCCTGGGCATCACCCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCG > 7:194869/1‑124 GCACTGAGCAGGTCGAACAGCCCCTGGGCATCACCCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCG < 8:194869/124‑1 TGAGCAGGTCGAACAGCCCCTGGGCATCACCCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGAT > 3:118372/1‑149 CTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGATGGCGATCAGCAGCAACTCTTCCGGTGTGC > 5:285991/1‑147 CTCAGTGCCCGTCTTGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGATGGCGATCAGCAGCAACTCTTCCGGTGTGCCAGGG < 8:112930/149‑1 CTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGATGGCGATCAGCAGCAACTCTTCCGGTGTGCCAG < 4:118372/147‑1 CCATCGACCTGTTGGTGCGCGACAACGGTGCCGAGGCGGCACGCAGCTTCATCGACCAGGTGTTCGAGCGCTACGCGCCGCACGCGGCTATTCCAATCGCGCCAGACGGGCACTGAGCAGGTCGAACAGCCCCTGGGCATCACCCTGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2807682‑2807533‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgctcAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGATGGCGATCAGCAGCAACTCTTCCGGTGTGCCAGGG > NC_002947/2807569‑2807714 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |