New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2807533 =	41 (0.810)	3 (0.060)	3/244	NT	6.9%	coding (907/969 nt)	Nuh	ribonucleoside hydrolase
	?	NC_002947	2807569 =	42 (0.880)					coding (943/969 nt) coding (211/213 nt)	Nuh PP_2461	ribonucleoside hydrolase hypothetical protein

GCGTCATCGCCTACCTGTTAAAGCCCGAGCTGTTCAGCGGCCGGCGTATCCACATGAGCATCGACAGCCGCGAAGGACCCACTTTCGGCCAGACAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGAT  >  NC_002947/2807387‑2807680                                                                                                                                                   |                                                                                                                                                    ccctggcacaccggaagagttgctgctgatcgccatcgacctgttggtgcgcgacaacggtgccgaggcggcacgcagcttcatcgaccaggtgttcgagcgctacgcgccgcacgcggctattccaatcgcgcaagacgggcactGAg                                                                                                                                                   <  8:112930‑M1/3‑1 (MQ=255)   ctggcacaccggaagagttgctgctgatcgccatcgacctgttggtgcgcgacaacggtgccgaggcggcacgcagcttcatcgaccaggtgttcgagcgctacgcgccgcacgcggctattccaatcgcgccagacgggcactGAg                                                                                                                                                   <  4:118372‑M1/3‑1 (MQ=255)    tCATCGCCTACCTGTTAAAGCCCGAGCTGTTCAGCGGCCGGCGTATCCACATGAGCATCGACAGCCGCGAAGGACCCACTTTCGGCCAGACAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAg                                                                                                                                                >  7:138248/1‑149 (MQ=255)      gcacaccggaagagttgctgctgatcgccatcgacctgttggtgcgcgacaacggtgccgaggcggcacgcagcttcatcgaccaggtgttcgagcgctacgcgccgcacgcggctattccaatcgcgccagacgggcactGAGCAg                                                                                                                                                >  5:285991‑M1/142‑147 (MQ=255)      aTCGCCTACCTGTTAAAGCCCGAGCTGTTCAGCGGCCGGCGTATCCACATGAGCATCGACAGCCGCGAAGGACCCACTTTCGGCCAGACAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAggg                                                                                                                                              <  7:285497/149‑1 (MQ=255)      aTCGCCTACCTGTTAAAGCCCGAGCTGTTCAGCGGCCGGCGTATCCACATGAGCATCGACAGCCGCGAAGGACCCACTTTCGGCCAGACAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAggg                                                                                                                                              >  8:266000/1‑149 (MQ=255)                    aaaGCCCGAGCTGTTCAGCGGCCGGCGTATCCACATGAGCATCGACAGCCGCGAAGGACCCCCTTTCGGCCAGACAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAgggg                                                                                                                                 <  7:169174/148‑1 (MQ=255)                             gCTGTTCAGCGGCCGGCGTATCCACATGAGCATCGACAGCCGCGAAGGACCCACTTTCGGCCAGACAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGAcc                                                                                                                       >  1:289192/1‑149 (MQ=255)                                   atcgacctgttggtgcgcgacaacggtgccgaggcggcacgcagcttcatcgaccaggtgttcgagcgctacgcgccgcacgcggctattccaatcgcgccagacgggcactGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCa                                                                                                                 >  3:118372‑M1/113‑149 (MQ=255)                                         ccggcGTATCCACATGAGCATCGACAGCCGCGAAGGACCCACTTTCGGCCAGACAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAgg                                                                                                                                               >  1:158238/1‑113 (MQ=255)                                         ccggcGTATCCACATGAGCATCGACAGCCGCGAAGGACCCACTTTCGGCCAGACAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAgg                                                                                                                                               <  2:158238/113‑1 (MQ=255)                                             cGTATCCACATGAGCATCGACAGCCGCGAAGGACCCACTTTCGGCCTGACAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCt                                                                                                       >  2:239773/1‑149 (MQ=255)                                                   cacaTGAGCATCGACAGCCGCGAAGGACACACTTTCGGCCAGACAATTGCAGACTGGAACGGTGAGCTCAAGCGGACGGCGAATCTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTACGACCTGCTCAGTGCCCGTCTGgcgc                                                                                                  >  4:106384/1‑148 (MQ=255)                                                     caTGAGCATCGACAGCCGCGAAGGACCCACTTTCGGCCAGACAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGAt                                                                                               >  8:104076/1‑149 (MQ=255)                                                     caTGAGCATCGACAGCCGCGAAGGACCCACTTTCGGCCAGACAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGAt                                                                                               <  7:266000/149‑1 (MQ=255)                                                           cATCGACAGCCGCGAAGGACCCACTTTCGGCCAGACAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGaa                                                                                          >  6:66076/1‑148 (MQ=255)                                                              cGACAGCCGCGAAGGACCCACTTTCGGCCAGACAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATTGc                                                                                      >  4:228789/1‑149 (MQ=255)                                                                cgaggcggcacgcagcttcatcgaccaggtgttcgagcgctacgcgccgcacgcggctattccaatcgcgccagacgggcactGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGc                                                                                                             <  8:194869‑M1/41‑1 (MQ=255)                                                                cgaggcggcacgcagcttcatcgaccaggtgttcgagcgctacgcgccgcacgcggctattccaatcgcgccagacgggcactGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGc                                                                                                             >  7:194869‑M1/84‑124 (MQ=255)                                                                ccAGCCGCGAAGGACCCACTTTCGGCCAGACAATTGCTGACTGGTACGGGGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCcg                                                                                    <  2:292306/148‑1 (MQ=255)                                                                aCAGCCGCGAAGGACCCACTTTCGGCCAGACAATTGCAGACTGGTACGGTGATCTCAAGCGGACCGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGTCTGTTCGACCTGCTCAGAGCCCGTCTGGCGCTATTGGAATAGAcg                                                                                    >  8:59072/1‑149 (MQ=255)                                                                   gCCGCGAAGGACCCACTTTCGGCCAGACAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATTGCCGCGt                                                                                 <  3:228789/149‑1 (MQ=255)                                                                      gcgAAGGACCCACTTTCGGCCAGACAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGt                                                                                                         <  7:287038/122‑1 (MQ=255)                                                                      gcgAAGGACCCACTTTCGGCCAGACAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGt                                                                                                         >  8:287038/1‑122 (MQ=255)                                                                              cccACTTTCGGCCAGACAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAg                                                                      >  2:16608/1‑149 (MQ=255)                                                                               ccACTTTCGGCCAGACAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAgc                                                                     <  8:138248/149‑1 (MQ=255)                                                                                 aCTTTCGGCCAGACAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAgcgc                                                                   >  3:279422/1‑149 (MQ=255)                                                                                   tttCGGCCAGCCAATTGCCGCCTGGTACGGGGGGCTCAAGCGGGCGGCGAATGGGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGgcg                                                                                                   <  3:127436/115‑1 (MQ=255)                                                                                       ggCCAGACAATTGCAGACTGGTACGGTGTGCGCCAGCGGCCGGCGAATGTGCTGGGGGTGGAGCAGGGTGCTGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGaa                                                              <  3:243457/148‑1 (MQ=255)                                                                                            gACAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTg                                                        <  5:66076/149‑1 (MQ=255)                                                                                             aCAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTgg                                                       <  1:16608/149‑1 (MQ=255)                                                                                             aCAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCACGAACACCTgg                                                       >  5:18609/1‑149 (MQ=255)                                                                                                           gTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGaa                                                              <  3:203150/128‑1 (MQ=255)                                                                                                           gTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGaa                                                              >  4:203150/1‑128 (MQ=255)                                                                                                            tACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCTCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGt                                        >  1:156373/1‑149 (MQ=255)                                                                                                             aCGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCAGTCTGGCGCGATTGGAATAGCCGCTTGCGGCGAGTAGCGCTCGAACACCTGGTCGATTAAGCTGCGTg                                       >  7:112930/1‑149 (MQ=255)                                                                                                                     cTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTc                                <  7:104076/148‑1 (MQ=255)                                                                                                                      tCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCgg                              >  1:13518/1‑149 (MQ=255)                                                                                                                        aaGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCgg                              <  4:279422/147‑1 (MQ=255)                                                                                                                         aGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCAc                           <  1:208062/149‑1 (MQ=255)                                                                                                                            ggccggcGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGt                        >  5:159097/1‑149 (MQ=255)                                                                                                                             gccggcGAATGTGCTGTGGGTGGAGCTGGGTGATGCGCAGGGGCTGTTCGTCCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGGGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGtt                       <  7:59072/149‑1 (MQ=255)                                                                                                                              acggcGAATGTGGTGTGGGTGGAGGAGGGTGATGCGCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTGGGCACCGTTg                      <  3:106384/148‑1 (MQ=255)                                                                                                                               cggcGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGt                     >  8:236348/1‑149 (MQ=255)                                                                                                                                ggcGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTc                                                                 <  4:173932/104‑1 (MQ=255)                                                                                                                                 gcGAATGTGCTGTGGGTGGAGCAGGGTGATTCTCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTcg                   <  2:156373/149‑1 (MQ=255)                                                                                                                                    aaTGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCgcgc                <  2:111204/149‑1 (MQ=255)                                                                                                                                              gggtggAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGt      >  2:152739/1‑149 (MQ=255)                                                                                                                                                 tggAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACTCCTGGTCGATGAAGCTGCGTGCCGACTCGGCACCGTTGTCGCGCACCAACAGGTCGa   >  7:282886/1‑149 (MQ=255)                                                                                                                                                 tggAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGa   >  8:157040/1‑149 (MQ=255)                                                                                                                                                 tggAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGa   >  8:161598/1‑149 (MQ=255)                                                                                                                                                  ggAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGAt  >  4:51350/1‑149 (MQ=255)                                                                                                                                                  ggAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGAt  >  8:87311/1‑149 (MQ=255)                                                                                                                                                   GAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTc                                <  2:317848‑M1/118‑1 (MQ=255)                                                                                                                                                   GAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTc                                >  1:317848‑M1/1‑118 (MQ=255)                                                                                                                                                   |                                                                                                                                                    GCGTCATCGCCTACCTGTTAAAGCCCGAGCTGTTCAGCGGCCGGCGTATCCACATGAGCATCGACAGCCGCGAAGGACCCACTTTCGGCCAGACAATTGCAGACTGGTACGGTGTGCTCAAGCGGCCGGCGAATGTGCTGTGGGTGGAGCAGGGTGATGCCCAGGGGCTGTTCGACCTGCTCAGTGCCCGTCTGGCGCGATTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGAT  >  NC_002947/2807387‑2807680

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.