| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2873270 = | 43 (0.850) | 3 (0.060) | 3/242 | NT | 7.4% | coding (50/474 nt) | cigR | membrane protein |
| ? | NC_002947 | 2873328 = | 35 (0.740) | coding (108/474 nt) | cigR | membrane protein | |||||
GCCGCCGTGCCAGTCATTGCCGCCGGCGCTCTGCTTGTGGCCGCCCGAATTGCCCTGGCCCTGGGCGTGCGGCGCCTGGCCCTTGCCGTGCCCCTGACCTTGGCCCTGGCCTTTGCCATTACCCGGGTCGGCGAGCACCGGACCAGAGGCCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2873424‑2873270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaaggTCAGGGGCACGGCAAGGGCCAGGCGCCGCACGCCCAGGGCCAGGGCAATTCGGGCGGCCACAAGCAGAGCGCCGGCGGCAATGACTGGCACGGCGGCCCGTCCATCGACCGTGGCGATGTACTGGGCATCCTCGGTGGCCACCGCAG > NC_002947/2873328‑2873474 GCCGGCGTGCCAGTCATTGCCGCCGGCGCTGTTCTTGTGGCCGCCCGAATTGCCCTGGCCCTGGGCGTGCGGCGCCTGGCCCTTGCAGTGCCCCTGACCTTGGCCCTGGCCTTTGCCATTACCCGGGTCGGCGAGCACCGGACCAGAGG < 2:299427/149‑1 GCCGTGCCAGTCATTGCCGCCGGCGCTCTGCTTGTGGCCGCCCGAATTGCCCTGGCCCTGGGCGTGCGGCGCCTGGCCCTTGCCGTGCCCCTGACCTTGGCCCTGGCCTTTGCCATTACCCGGGTCGGCGAGCACCGGACCAGAGGCC > 4:146662/1‑148 CCGTGCCAGTCATTGCCGCCGGCGCTCTGCTTGTGGCCGCCCGAATTGCCCTGGCCCTGGGCGTGCGGCGCCTGGCCCTTGCCGTGCCCCTGACCTTGGCCCTGGCCTTTGCCATTACCCGGGTCGGCGAGCACCGGACCAGAGGCCAA < 4:101867/149‑1 CGTGCCAGTCATTGCCGCCGGCGCTCTGCTTGTGGCCGCCCGAATTGCCCTGGCCCTGGGCGTGCGGCGCCTGGCCCTTGCCGTGCCCCTGACCTTGGCCCTGGCCTTTGCCATTACCCGGGTCGGCGAGCACCGGACCAGAGGCCAAG < 4:296793/149‑1 CTTGGCCCTGGCCTTTGCCATTACCCGGGTCGGCGAGCACCGGACCAGAGGCCAAGGTCAGGGGCACGGCAAGGGCCAGGCGCCGCACGCCCAGGGCCAGGGCAATTCGGGCGGCCACAAGCAGAGCGCCGGCGGCAATGACTGGCACG > 6:203671/1‑149 TTGGCCCTGGCCTTTGCCATTACCCGGGTCGGCGAGCACCGGACCAGAGGCCAAGGTCAGGGGCACGGCAAGGGCCAGGCGCCGCACGCCCAGGGCCAGGGCAATTCGGGCGGCCACAAGCAGAGCGCCGGCGGCAATGACTGGCACGG > 2:322314/1‑149 GCCTTTGCCATTACCCGGGTCGGCGAGCACCGGACCAGAGGCCAAGGTCAGGGGCACGGCAAGGGCCAGGCGCCGCACGCCCAGGGCCAGGGCAATTCGGGCGGCCACAAGCAGAGCGCCGGCGGCAATGACTGGCACGGCGGCCCGT < 5:203671/148‑1 AGGTCAGGGGCACGGCAAGGGCCAGGCGCCGCACGCCCAGGGCCAGGGCAATTCGGGCGGCCACAAGCAGAGCGCCGGCGGCAATGACTGGCACGGCGGCACGTCCATCGACCGTGGCGATGTACTGGGCATCCTCGGTGGCCACCG > 5:60762/1‑147 AGGTCAGGGGCACGGCAAGGGCCAGGCGCCGCACGCCCAGGGCCAGGGCAATTCGGGCGGCCACAAGCAGAGCGCCGGCGGCAATGACTGG > 7:156027/1‑91 AGGTCAGGGGCACGGCAAGGGCCAGGCGCCGCACGCCCAGGGCCAGGGCAATTCGGGCGGCCACAAGCAGAGCGCCGGCGGCAATGACTGG < 8:156027/91‑1 GGTCAGGGGCACGGCAAGGGCCAGGCGCCGCACGCCCAGGGCCAGGGCAATTCGGGCGGCCACCAGCAGAGCGCCGGCGGCAATGACTGGCACGGCGGCCCGTCCATCGACCGTGGCGATGTACTGGGCATCCTCGGTGGCCACCGCAG > 8:206441/1‑149 GCCGCCGTGCCAGTCATTGCCGCCGGCGCTCTGCTTGTGGCCGCCCGAATTGCCCTGGCCCTGGGCGTGCGGCGCCTGGCCCTTGCCGTGCCCCTGACCTTGGCCCTGGCCTTTGCCATTACCCGGGTCGGCGAGCACCGGACCAGAGGCCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2873424‑2873270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaaggTCAGGGGCACGGCAAGGGCCAGGCGCCGCACGCCCAGGGCCAGGGCAATTCGGGCGGCCACAAGCAGAGCGCCGGCGGCAATGACTGGCACGGCGGCCCGTCCATCGACCGTGGCGATGTACTGGGCATCCTCGGTGGCCACCGCAG > NC_002947/2873328‑2873474 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |