New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3042377	41 (0.810)	4 (0.080)	4/250	NT	8.1%	coding (280/315 nt)	PP_5537	membrane protein
	?	NC_002947	= 3042402	51 (1.050)					coding (305/315 nt)	PP_5537	membrane protein

CCAGGTGGTCATCGACCTGTACCTGATGGCCGGGCTGGCCGGTTGCTGGATGGTGCGAGACAACCGCATGCGCGGCAGAGCCGGGATCGCGGTGCTGCCTTACCTGCTGCTGACCGTCGTGTTCGTTTCGCTGGGGCCGTTGCTGTACCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3042226‑3042377 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggCGCCCCTCGGCAACGCCTCTGGTCACCAGGTACAGCAACGGCCCCAGCGAAACGAACACGACGGTCAGCAGCAGGTAAGGCAGCACCGCGATCCCGGCTCTGCCGCGCATGCGGTTGTCTCGCACCATCCAGCAACCGGCCAGCCCG  <  NC_002947/3042402‑3042256                                                                                                                                                                                                                                                                                                             CCAGGTGGTCATCGACCTGTACCTGATGGCCGGGCTGGCCGGTTGCTGGATGGTGCGAGACAACCGCATGCGCGGCAGAGCCGGGATCGCGGTGCTGCCTTACCTGCTGCTGACCGTCGTGTTCGTTTCGCTGGGGCCGTTGCTGTACC                                                                                                                                                        >  2:278328/1‑149              GACCTGTACCTGATGGCCGGGCTGGCCGGTTGCTGGATGGTGCGAGACAACCGCATGCGCGGCAGAGCCGGGATCGCGGTGCTGCCTTACCTGCTGCTGACCGTCGTGTTCGTTTCGCTGGGGCCGTTGCTGTACCT                                                                                                                                                       >  3:221008/1‑137              GACCTGTACCTGATGGCCGGGCTGGCCGGTTGCTGGATGGTGCGAGACAACCGCATGCGCGGCAGAGCCGGGATCGCGGTGCTGCCTTACCTGCTGCTGACCGTCGTGTTCGTTTCGCTGGGGCCGTTGCTGTACCT                                                                                                                                                       <  4:221008/137‑1                                                    GGTGCGAGACAACCGCATGCGCGGCAGAGCCGGGATCGCGGTGCTGCCTTACCTGCTGCTGACCGTCGTGTTCGTTTCGCTGGGGCCGTTGCTGTACCTGGCGCCCCTCGGCAACGCCTCTGGTCACCAGG                                                                                                                       >  3:247725/1‑131                                                    GGTGCGAGACAACCGCATGCGCGGCAGAGCCGGGATCGCGGTGCTGCCTTACCTGCTGCTGACCGTCGTGTTCGTTTCGCTGGGGCCGTTGCTGTACCTGGCGCCCCTCGGCAACGCCTCTGGTCACCAGG                                                                                                                       <  4:247725/131‑1                                                           GACAACCGCATGCGCGGCAGAGCCGGGATCGCGGTGCTGCCTTACCTGCTGCTGACCGTCGTGTTCGTTTCGCTGGGGCCGTTGCTGTACCTGGCGCCCCTCGGCAACGCCTCTGGTCACCA                                                                                                                         >  5:267000/1‑122                                                           GACAACCGCATGCGCGGCAGAGCCGGGATCGCGGTGCTGCCTTACCTGCTGCTGACCGTCGTGTTCGTTTCGCTGGGGCCGTTGCTGTACCTGGCGCCCCTCGGCAACGCCTCTGGTCACCA                                                                                                                         <  6:267000/122‑1                                                                                                                                                        GCGCCCCTCGTCAACGCCGCTGGGCACCAGGTACAGCAACGGCCCCAGCGAAACGAACACGACTGTCAGCAGCAGGTAAGGCAGCACCGCGATCCCGGCTCTGCCGCGCATGCGGTTGTCTCGCACCATCCAGCAACCGGCCAGCCCG  <  6:187591/148‑1                                                                                                                                                        GCGCCCCTCGGCAACGCCTCTGGTCACCAGGTACAGCAACGGCCCCAGCGAAACGAACACGACGGTCAGCAGCAGGTAAGGCAGCACCGCGATCCCGGCTCTGCCGCGCATGCGGTTGTCTCGCACCATCCAGCAACCGGCCAGCCCG  <  6:7858/148‑1                                                                                                                                                                                                                                                                                                             CCAGGTGGTCATCGACCTGTACCTGATGGCCGGGCTGGCCGGTTGCTGGATGGTGCGAGACAACCGCATGCGCGGCAGAGCCGGGATCGCGGTGCTGCCTTACCTGCTGCTGACCGTCGTGTTCGTTTCGCTGGGGCCGTTGCTGTACCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3042226‑3042377 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggCGCCCCTCGGCAACGCCTCTGGTCACCAGGTACAGCAACGGCCCCAGCGAAACGAACACGACGGTCAGCAGCAGGTAAGGCAGCACCGCGATCCCGGCTCTGCCGCGCATGCGGTTGTCTCGCACCATCCAGCAACCGGCCAGCCCG  <  NC_002947/3042402‑3042256

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.