New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3051679 =	67 (1.330)	3 (0.060)	3/248	NT	5.5%	coding (379/1899 nt)	PP_2664	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	3051750 =	39 (0.810)					coding (450/1899 nt)	PP_2664	two‑component system sensor histidine kinase/response regulator

CGTTGATATTGGTCTCGGCGAACTCGAACGTCACGCTCTCCCCCGCCAGTGCCCGCGCCACATAGCCTTCCAGGCGCTGGTAGTGCTGCTCGCTGTGGGCCTCGCGCAGGCTCTGGCCCAGCATCACGCCATGCGGCCAGCAATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3051826‑3051679 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taccaGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACGCTACATGCTGCGTTCCTACGTACCGAACCGCCTGGCCAGTGGCGAAGTGGTGGGTATCTTC  >  NC_002947/3051750‑3051897                                                                                                                                                                                                                                                                                                          CGTTGATATTGGTCTCGGCGAACTCGAACGTCACGCTCTCCCCCGCCAGTGCCCGCGCCACATAGCCTTCCAGGCGCTGGTAGTGCTGCTCGCTGTGGGCCTCGCGCAGGCTCTGGCCCAGCATCACGCCATGCGGCCAGCAATACCA                                                                                                                                                      >  8:162803/1‑148     GATATTGGTCTCGGCGAACTCGAACGTCACGCTCTCCCCCGCCAGTGCCCGCGCCACATAGCCTTCCAGCCGCTGTTAGTGCTGCTCGATGTGGGCGTCGCGAAGCCACTGGCCCAGCATCCCGCCATGCGGCCAGCAATACCcagttt                                                                                                                                                 >  7:155346/1‑143                                   GCTCTCCCCCGCCAGTGCCCGCGCCACATAGCCTTCCAGGCGCTGGTAGTGCTGCTCGCTGTGGGCCTCGCGCAGGCTCTGGCCCAGCATCACGCCATGCGGCCAGCAATACCA                                                                                                                                                      <  5:29608/114‑1                                   GCTCTCCCCCGCCAGTGCCCGCGCCACATAGCCTTCCAGGCGCTGGTAGTGCTGCTCGCTGTGGGCCTCGCGCAGGCTCTGGCCCAGCATCACGCCATGCGGCCAGCAATACCA                                                                                                                                                      >  6:29608/1‑114                                                                            GCTGGTAGTGCTGCTCGCTGTGGGCCTCGCGCAGGCTCTGGCCCAGCATCACGCCATGCGGCCAGCAATACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAAC                                                                          >  6:186830/1‑149                                                                             CTGGTAGTGCTGCTCGCTGTGGGCCTCGCGCAGGCTCTGGCCCAGCATCACGCCATGCGGCCAGCAATACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACG                                                                         >  4:274125/1‑149                                                                                            GCTGTGGGCCTCGCGCAGGCTCTGGCCCAGCATCACGCCATGCGGCCAGCAATACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACGCTAC                                                           <  3:274125/148‑1                                                                                                                                                taaCAGCGCCTGGAAGGCTATGTCGCGCGGGCACTGGCGGGGGAGAGCGTGACGATCGAGTTCCCCGAGACCAATATCAACGGCCATGAACGCTACATGCTGCGTTCCTACGAACCGAACCGCCTGGCCAGTGGCGAAGTGGTGGGTAT      >  2:158130/4‑149                                                                                                                                                TACCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACGCTACATGCTGCGTTCCTACGTACCGAACCGCCTGGCCAGTGGCGAAGTGGTGGGTAT      >  4:442/1‑149                                                                                                                                                  CCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACGCTACATGCTGCGTTCCTACGTACCGAACCGCCTGGCCAGTGGCGAAGTGGTGGGTATCT    >  7:37667/1‑149                                                                                                                                                  CCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACGCTACATGCTGCGTTCCTACGTACCGAACCGCCTGGCCAGTGGCGAAGTG              <  3:208526/139‑1                                                                                                                                                  CCAGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACGCTACATGCTGCGTTCCTACGTACCGAACCGCCTGGCCAGTGGCGAAGTG              >  4:208526/1‑139                                                                                                                                                    AGCGCCTGGTAGGCTATGGGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGTCCAGGACCTCTACATGCTGCGTTCCTACGTAGCGAACCGCCTGGCCAGTGGCGAAGGGGTGGGTATCTTC  <  2:260194/149‑1                                                                                                                                                                                                                                                                                                          CGTTGATATTGGTCTCGGCGAACTCGAACGTCACGCTCTCCCCCGCCAGTGCCCGCGCCACATAGCCTTCCAGGCGCTGGTAGTGCTGCTCGCTGTGGGCCTCGCGCAGGCTCTGGCCCAGCATCACGCCATGCGGCCAGCAATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3051826‑3051679 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taccaGCGCCTGGAAGGCTATGTGGCGCGGGCACTGGCGGGGGAGAGCGTGACGTTCGAGTTCGCCGAGACCAATATCAACGGCCAGGAACGCTACATGCTGCGTTCCTACGTACCGAACCGCCTGGCCAGTGGCGAAGTGGTGGGTATCTTC  >  NC_002947/3051750‑3051897

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.