| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3117011 = | 48 (0.950) | 4 (0.090) | 4/240 | NT | 8.2% | coding (384/489 nt) | PP_2733 | membrane protein |
| ? | NC_002947 | 3117102 = | 45 (0.960) | coding (293/489 nt) | PP_2733 | membrane protein | |||||
CCTGGCCCCTGCCGCTGTGGCTAGCGCTGCTGTGGTTGGTGCTGGCCAGCGGGATGCGTCACAGCCTGGCATGGGCCGGCAGGCACTGGCGAATCGGCGCACTGCTGGGGGCGATTGGCGGCCCTCTGGCCTATGTAGGCGGCGCCAGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3117162‑3117011‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggctgTGACGCATCCCGCTGGCCAGCACCAACCACAGCAGCGCTAGCCACAGCGGCAGGGGCCAGGCGTCGAAACCGAACACCCCCAGCGCTCCCAGCACGCTGTCGAGCACGCAGCCGACAAAGGTGACGCGCAACAGCGCCTT > NC_002947/3117102‑3117241 CCTGGCCCCTGCGGCTGTGGCTAGCGCTGCTGTGGTTGGTGCTGGCCAGCGGGATGCGTCACAGCCTGGCATGGGCCGGCAGGCACTGGCGAATCGGCGCACTGCTGGGGGCGATTGGCGGCCCTCTGGCCTATGTAGGCGGCGCCAGG < 8:205630/149‑1 CTGGCCCCTGCCGCTGTGGCTAGCGCTGCTGTGGTTGGTGCTGGCCAGCGGGATGCGTCACAGCCTGGCATGGGCCGGCAGGCACTGGCGAATCGGCGCACTGCTGGGGGCGATTGGCGGCCCTCTGGCCTATGTAGGCGGCGCCAGGC < 7:41673/149‑1 TGCTGGCCAGCGGGATGCGTCACAGCCTGGCATGGGCCGGCAGGCACTGGCGAATCGGCGCACTGCTGGGGGCGATTGGCGGCCCTCTGGCCTATGTAGGCGGCGCCAG < 5:72857/109‑1 TGCTGGCCAGCGGGATGCGTCACAGCCTGGCATGGGCCGGCAGGCACTGGCGAATCGGCGCACTGCTGGGGGCGATTGGCGGCCCTCTGGCCTATGTAGGCGGCGCCAG > 6:72857/1‑109 TCACAGCCTGGCATGGGCCGGCAGGCACTGGCGAATCGGCGCACTGCTGGGGGCGATTGGCGGCCCTCTGGCCTATGTAGGCGGCGCCAGGCTGTGACGCATCCCGCTGGCCAGCACCAACCACAGCAGCGCTAGCCACAGCGGCAGGG > 3:248912/1‑149 AGCCTGGCATGGGCCGGCAGGCACTGGCGAATCGGCGCACTGCTGGGGGCGATTGGCGGCCCTCTGGCCTATGTAGGCGGCGCCAGGCTGTGACGCATCCCGCTGGCCAGCACCAACCACAGCAGCGCTAGCCACAGCGGCAGGGGC > 2:137181/1‑147 GCATGGGCCGGCAGGCACTGGCGAATCGGCGCACTGCTGGGGGCGATTGGCGGCCCTCTGGCCTATGTAGGCGGCGCCAGGCTGTGACGCATCCCGCTGGCCAGCACCAACCACAGCAGCGCTAGCCACAGCGGCAGGGGCCAGGCGTC < 1:137181/149‑1 TGTAGGCGGCGCCAGGCTGTGACGCATCCCGCTGGCCAGCACCAACCACAGCAGCGCTAGCCACAGCGGCAGGGGCCAGGCGTCGAAACCGAACACCCCCAGCGCTCCCAGCACGCTGTCGAGCACGCAGCCGACAAAGGTGACGCG < 4:248912/147‑1 CCAGGCTGTGACGCATCCCGCTGGCCAGCACCAACCACAGCAGCGCTAGCCACAGCGGCAGGGGCCAGGCGTCGAAACCGAACACCCCCAGCGCTCCCAGCACGCTGTCGAGCACGCAGCCGACAAAGGTGACGCGCAACAGCGCCTT > 1:112900/1‑148 CCTGGCCCCTGCCGCTGTGGCTAGCGCTGCTGTGGTTGGTGCTGGCCAGCGGGATGCGTCACAGCCTGGCATGGGCCGGCAGGCACTGGCGAATCGGCGCACTGCTGGGGGCGATTGGCGGCCCTCTGGCCTATGTAGGCGGCGCCAGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3117162‑3117011‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggctgTGACGCATCCCGCTGGCCAGCACCAACCACAGCAGCGCTAGCCACAGCGGCAGGGGCCAGGCGTCGAAACCGAACACCCCCAGCGCTCCCAGCACGCTGTCGAGCACGCAGCCGACAAAGGTGACGCGCAACAGCGCCTT > NC_002947/3117102‑3117241 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |