| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3562109 | 39 (0.770) | 3 (0.060) | 3/248 | NT | 7.5% | coding (423/822 nt) | PP_3145 | hypothetical protein |
| ? | NC_002947 | = 3562140 | 36 (0.740) | coding (392/822 nt) | PP_3145 | hypothetical protein | |||||
GATAGGGATCACCTCGTAAGGCCTGAGGCCCTCGTTACTGGTGGACACTGCCGTGATCGCCGGGCGCACCACGATCACGCCCGGGCCAGGCCCCTTGGCCAACGGCATCACGCTGGCCATTTCGCGGCGCAGGGCCTCGTTGAAGTAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3561959‑3562109‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggTTATCTCGCAGCAGACGCTGCAGGAAATCACCCGCTACTTCAACGAGGCCCTGCGCCGCGAAATGGCCAGCGTGATGCCGTTGGCCAAGGGGCCTGGCCCGGGCGTGATCGTGGTGCGCCCGGCGATCACGGCAGTGTCCACCAGT < NC_002947/3562140‑3561995 GATAGGGATCACCTCGTAAGGCCTGAGGCCCTCGTTACTGGTGGACACTGCCGTGATCGCCGGGCGCACCACGATCACGCCCGGGCCAGGCCCCTTGGCCAACGGCATCACGCTGGCCATTTCGCGGCGCAGGGCCTCGTTGAAGTAGC < 1:159385/149‑1GATAGGGATCACCTCGTAAGGCCGGAGGCCCTCGTTACTGGGGGACACTGCCGTGATCGCCGGGCGCACCACGATCACGCCCGGGCCAGGCCCCTTGGCCAACGGCATCACGCTGGCCATTTCGCGGCGCAGGGCCTCGTTGAAGTAGC < 7:143815/149‑1 GATCACCTCGTAAGGCCTGAGGCCCTCGTTACTGGTGGACACTGCCGTGATCGCCGGGCGCACCACGATCACGCCCGGGCCAGGCCCCTTGGCCAACGGCATCACGCTGGCCATTTCGCGGCGCAGGGCCTCGTTGAAGTAGCGGTTAT > 5:1028/1‑149 CTCGTTACTGGTGGACACTGCCGTGATCGCCGGGCGCACCACGATCACGCCCGGGCCAGGCCCCTTGGCCAACGGCATCACGCTGGCCATTTCGCGGCGCAGGGCCTCGTTGAAGTAGCG < 3:252782/120‑1 CTCGTTACTGGTGGACACTGCCGTGATCGCCGGGCGCACCACGATCACGCCCGGGCCAGGCCCCTTGGCCAACGGCATCACGCTGGCCATTTCGCGGCGCAGGGCCTCGTTGAAGTAGCG > 4:252782/1‑120 ACACTGCCGTGATCGCCGGGCGCACCACGATCACGCCCGGGCCAGGCCCCTTGGCCAACGGCATCACGCTGGCCATTTCGCGGCGCAGGGCCTCGTTGAAGTAGCGGTTATCTCGCAGCAGACGCTGCAGGAAATCACCCGCTACTTCA < 6:1028/149‑1 TGCCGTGATCGCCGGGCGCACCACGATCACGCCCGGGCCAGGCCCCTTGGCCAACGGCATCACGCTGGCCATTTCGCGGCGCAGGGCCTCGTTGAAGTAGCGGTTATCTCGCAGCAGACGCTGCAGGAAATCAC > 1:92087/1‑134 TGCCGTGATCGCCGGGCGCACCACGATCACGCCCGGGCCAGGCCCCTTGGCCAACGGCATCACGCTGGCCATTTCGCGGCGCAGGGCCTCGTTGAAGTAGCGGTTATCTCGCAGCAGACGCTGCAGGAAATCAC < 2:92087/134‑1 cGCGGTTCTCTCGCAGCAGACGCTGCAGGAAATCACCCGCTACTTCAACGAGGCCCTGCGCCGCGAAATGGCCAGCGTGATGCCGTTGGCCAAGGGGCCTGGCCCGGGCGTGATCGTGGTGCGCCCGGCGATCACGGCAGTGTCCACCA < 8:80284/148‑1 CGGTTATCTCGCAGCAGACGCTGCAGGAAATCACCCGCTACTTCAACGAGGCCCTGCGCCGCGAAATGGCCAGCGTGATGCCGTTGGCCAAGGGGCCTGGCCCGGGCGTGATCGTGGTGCGCCCGGCGATCACGGCAGTGTCCACCAGT < 5:247132/149‑1 GATAGGGATCACCTCGTAAGGCCTGAGGCCCTCGTTACTGGTGGACACTGCCGTGATCGCCGGGCGCACCACGATCACGCCCGGGCCAGGCCCCTTGGCCAACGGCATCACGCTGGCCATTTCGCGGCGCAGGGCCTCGTTGAAGTAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3561959‑3562109‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggTTATCTCGCAGCAGACGCTGCAGGAAATCACCCGCTACTTCAACGAGGCCCTGCGCCGCGAAATGGCCAGCGTGATGCCGTTGGCCAAGGGGCCTGGCCCGGGCGTGATCGTGGTGCGCCCGGCGATCACGGCAGTGTCCACCAGT < NC_002947/3562140‑3561995 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |