| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3623866 = | 45 (0.890) | 3 (0.060) | 3/244 | NT | 7.5% | coding (187/1344 nt) | PP_3194 | hypothetical protein |
| ? | NC_002947 | 3623927 = | 31 (0.650) | coding (126/1344 nt) | PP_3194 | hypothetical protein | |||||
GATCATCGAAGACGGCGTGATCCGCCATGTCGGGCCAACCGCCGAGGCACCCCGTCCACAACCCGGCGACCGTGAAGCCCACGGCCAGTTCGTCATGCCCGGGCTGGTGGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3623978‑3623866‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggacgGGGTGCCTCGGCGGTTGGCCCGACATGGCGGATCACGCCGTCTTCGATGATCAATGTCTGTCGTTGGCGGGTGTGCAGGCCAGTGCCGTCGAACAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTT > NC_002947/3623927‑3624071 GATCATCGAAGACGGCGTGATCCGCCATGTCGGGCCAACCGCCGAGGCACCCCGTCCACAACCCGGCGACCGTGAAGCCCACGGCCAGTTCGTCATGCCCGGGCTGGTG > 1:216286/1‑109GATCATCGAAGACGGCGTGATCCGCCATGTCGGGCCAACCGCCGAGGCACCCCGTCCACAACCCGGCGACCGTGAAGCCCACGGCCAGTTCGTCATGCCCGGGCTGGTG < 2:216286/109‑1 CCCGTCCACAACCCGGCGACCGTGAAGCCCACGGCCAGTTCGTCATGCCCGGGCTGGTGGACGGGGTGCCTCGGCGGTTGGCCCGACATGGCGGATCACGCCGTCTTCGATGATCAATGTCTGTCGTTGGCGGGTGTGCAGGCCAGTGC > 6:129830/1‑149 CCGTCCACAACTCGGCGACCGTGAAGCCCACGGCCAGTTCGTCATGCCCGGGCTGGTGGACGGGGTGCCTCGGCGGTTGGCCCGACATGGCGGATCACGCCGTCTTCGATGATCAATGTCTGTCGTTGGCGGGTGTGCAGGCCAGTGCC > 1:162710/1‑149 GGCGACCGTGAAGCCCACGGCCAGTTCGTCATGCCCGGGCTGGTGGACGGGGTGCCTCGGCGGTTGGCCCGACATGGCGGATCACGCCGTCTTCGATGATCAATGTCTGTCGTTGGCGGGTGTGCAGGCCAGTGCCGTCGAACAGGGTG < 5:129830/149‑1 GGCTGGTGGACGGGGTGCCTCGGCGGTTGGCCCGACATGGCGGATCACGCCGTCTTCGATGATCAATGTCTGTCGTTGGCGGGTGTGCAGGCCAGTGCCGTCGAACAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCT < 2:162710/149‑1 GGACGGGGTGCCTCGGCGGTTGGCCCGACATGGCGGATCACGCCGTCTTCGATGATCAATGTCTGTCGTTGGCGGGTGTGCAGGCCAGTGCCGTCGAACAGGGTGGAG > 5:277519/1‑108 GGACGGGGTGCCTCGGCGGTTGGCCCGACATGGCGGATCACGCCGTCTTCGATGATCAATGTCTGTCGTTGGCGGGTGTGCAGGCCAGTGCCGTCGAACAGGGTGGAG < 6:277519/108‑1 GACGGGGTGCCTCGGCGGATGGCCCGACATGGAGGATCAAGCAGTCTTCGATGATCAATGTCTGTCGTTGGCGGGTGTGCAGGCTAGTCCCGTCGAACACGGTGGAGCAGTGCAGGTGCAGGGAACTCATTGGAGAGCTCTCTCATCat > 2:196463/1‑147 GATCATCGAAGACGGCGTGATCCGCCATGTCGGGCCAACCGCCGAGGCACCCCGTCCACAACCCGGCGACCGTGAAGCCCACGGCCAGTTCGTCATGCCCGGGCTGGTGGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3623978‑3623866‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggacgGGGTGCCTCGGCGGTTGGCCCGACATGGCGGATCACGCCGTCTTCGATGATCAATGTCTGTCGTTGGCGGGTGTGCAGGCCAGTGCCGTCGAACAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTT > NC_002947/3623927‑3624071 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |