| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3676017 = | 43 (0.850) | 3 (0.070) | 3/230 | NT | 8.3% | intergenic (+24/+68) | PP_3240/PP_5592 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 3676068 = | 28 (0.620) | intergenic (+75/+17) | PP_3240/PP_5592 | hypothetical protein/hypothetical protein | |||||
GTGGCGGTAAGCAATGATCACCAGATCAGCGTGCACTACCCGATCAAGCTGTCGGCGGCGGGCGTAGAGGCCGCCAGGCGCGCTGAAGGCTGACAGTCGTCTGTGGTGACCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3676177‑3676017‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttgccggcgacgGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACGCTACCGTCATGAATCAAACCGGCTTCCTGCAACGTC > NC_002947/3676068‑3676214 GTGGCGGTAAGCAATGATCACCAGATCAGCGTGCACTACCCGATCAAGCTGTCGGCGGCGGGCGTAGAGGCCGCCAGGCGCGCTGAAGGCTGACAGTCGTCTGTGGTGACCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGC > 6:227235/1‑149 GCAATGATCACCAGATCAGCGTGCACTACCCGATCAAGCTGTCGGCGGCGGGCGTAGAGGCCGCCAGGCGCGCTGAAGGCTGACAGTCGTCTGTGGTGACCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGA < 1:114571/149‑1 CAATGATCACCAGATCAGCGTGCACTACCCGATCAAGCTGTCGGCGGCGGGCGTAGAGGCCGCCAGGCGCGCTGAAGGCTGACAGTCGTCTGTGGTGACCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGAC > 1:17663/1‑149 CAATGATCACCAGATCAGCGTGCACTACCCGATCAAGCTGTCGGCGGCGGGCGTAGAGGCCGCCAGGCGCGCTGAAGGCTGACAGTCGTCTGTGGTGACCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGAC > 3:158028/1‑149 CGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATC < 3:98706/117‑1 CGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATC > 4:98706/1‑117 CGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTAC > 5:75529/1‑149 CCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACGCTACCGTCATGAATCAAACCGGCTTCCT < 2:114571/148‑1 CGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACGCTACCGTCATGAATCAAACCGGCTTCCTGC < 2:241600/149‑1 CGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACGCTACCGTCATGAA > 2:162667/1‑132 CGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACGCTACCGTCATGAATCAAACCGGCTTCCTGCAACGTC > 3:161192/1‑149 GTGGCGGTAAGCAATGATCACCAGATCAGCGTGCACTACCCGATCAAGCTGTCGGCGGCGGGCGTAGAGGCCGCCAGGCGCGCTGAAGGCTGACAGTCGTCTGTGGTGACCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3676177‑3676017‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttgccggcgacgGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACGCTACCGTCATGAATCAAACCGGCTTCCTGCAACGTC > NC_002947/3676068‑3676214 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |