| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3727148 | 29 (0.580) | 4 (0.080) | 4/248 | NT | 11.3% | coding (361/645 nt) | PP_3292 | membrane protein |
| ? | NC_002947 | = 3727189 | 35 (0.720) | coding (402/645 nt) | PP_3292 | membrane protein | |||||
CGTGAAGCGCACCGTTGGCAAAGCCATTTTCAACGGCCAGGAGACAGGCTGGCAGGCCAGACTGGCGTTCCTTCGCTCAGTGGCTCGGGAATCGAACATCCTGCTGGTGGTGCTGTTGTGCCTGGCCCTGCTGGGCACAGGCACCTTTTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3726997‑3727148‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggcCTCGCAGTTCGCCACGATCTGCGTCACTGAGCGCCCTGCCAGCCAAAAGGTGCCTGTGCCCAGCAGGGCCAGGCACAACAGCACCACCAGCAGGATGTTCGATTCCCGAGCCACTGAGCGAAGGAACGCCAGTCTGGCCTGCCAGCCT < NC_002947/3727189‑3727042 CGTGAAGCGCACCGTTGGCAAAGCCATTTTCAACGGCCAGGAGACAGGCTGGCAGGCCAGACTGGCGTTCCTTCGCTCAGTGGCTCGGGAATCGAACATCCTGCTGGTGGTGCTGTTGAGCCTGGCCCTGCTGGGCACAGGCACCTTTT < 1:26339/149‑1 TGAAGCGCACCGTTGGCAAAGCCATTTTCAACGGCCAGGAGACAGGCTGGCAGGCCAGACTGGCGTTCCTTCGCTCAGTGGCTCGGGAATCGAACATCCTGCTGGTGGTGCTGTTGTGCCTGGCCCTGCTGGGCACAGGCACCTTTTGG < 4:80201/149‑1 TGAAGCGCACCGTTGGCAAAGCCATTTTCAACGGCCAGGAGACAGGCTGGCAGGCCAGACTGGCGTTCCTTCGCTCAGTGGCTCGGGAATCGAACATCCTGCTGGTGGTGCTGTTGTGCCTGGCCCTGCTGGGCACAGGCACCTTTTGG < 5:323754/149‑1 ACCGTTGGCAAAGCCATTTTCAACGGCCAGGAGACAGGCTGGCAGGCCAGACTGGCGTTCCTTCGCTCAGTGGCTCGGGAATCGAACATCCTGCTGGTGGTGCTGTTGTGCCTGGCCCTGCTGGGCACAGGCACCTTTTGGCCTCGCAG > 6:102205/1‑149 gcCAGTCTGGCCTGCCAGCCTGGCGTTCCTTCGCTCAGTGGCTCGGGAATCGAACATCCTGCTGGTGGTGCTGTTGTGCCTGGCCCTGCTGGGCACAGGCACCTTTTG > 1:22013/3‑108 gcCAGTCTGGCCTGCCAGCCTGGCGTTCCTTCGCTCAGTGGCTCGGGAATCGAACATCCTGCTGGTGGTGCTGTTGTGCCTGGCCCTGCTGGGCACAGGCACCTTTTG < 2:22013/106‑1 AGGCTGGCAGGCCAGACTGGCGTTCCTTCGCTCAGTGGCTCGGGAATCGAACATCCTGCTGGTGGTGCTGTTGTGCCTGGCCCTGCTGGGCACAGGCACCTTTTGGCCTCGCAGTTCGCCACGATCTGCGTCACTGAGCGCCCTGCCAG > 2:314944/1‑149 CAGGCCAGACTGGCGTTCCTTCGCTCAGTGGCTCGGGAATCGAACATCCTGCTGGTGGTGCTGTTGTGCCTGGCCCTGCTGGGCACAGGCACCTTTTGGCCTCGCAGTTCGCCACGATCTGCGTCACTGAGCGCCCTGCCAGCCAAAAG < 5:102205/149‑1 AGGCCAGACTGGCGTTCCTTCGCTCAGTGGCTCGGGAATCGAACATCCTGCTGGTGGTGCTGTTGTGCCTGGCCCTGCTGGGCACAGGCACCTTTTGGCCTCGCAGTTCGCCACGATCTGCGTCACTGAGCGCCCTGCCAGCCAAAAGG < 1:314944/149‑1 GCCTCGCAGTTCGCCACGATCTGCGTCACTGAGCGCCCTGCCAGCCAAAAGGTGCCTGTGCCCAGCAGGGCCAGGCACAACAGCACCACCAGCAGGATGTTCGATTCCCGAGCCACTGAGCGAAGGAACGCCAGTCTGGCCTGCCAGCC > 7:110526/1‑149 CCTCGCAGTTCGCCACGATCTGCGTCACTGAGCGCCCTGCCAGCCAAAAGGTGCCTGTGCCCAGCAGGGCCAGGCACAACAGCACCACCAGCAGGATGTTCGATTCCCGAGCCACTGAGCGAAGGAACGCCAGTCTGGCCTGCCAGCCT < 5:96765/149‑1 CGTGAAGCGCACCGTTGGCAAAGCCATTTTCAACGGCCAGGAGACAGGCTGGCAGGCCAGACTGGCGTTCCTTCGCTCAGTGGCTCGGGAATCGAACATCCTGCTGGTGGTGCTGTTGTGCCTGGCCCTGCTGGGCACAGGCACCTTTTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3726997‑3727148‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggcCTCGCAGTTCGCCACGATCTGCGTCACTGAGCGCCCTGCCAGCCAAAAGGTGCCTGTGCCCAGCAGGGCCAGGCACAACAGCACCACCAGCAGGATGTTCGATTCCCGAGCCACTGAGCGAAGGAACGCCAGTCTGGCCTGCCAGCCT < NC_002947/3727189‑3727042 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |