New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3728844	46 (0.910)	4 (0.080)	4/242	NT	8.2%	coding (715/891 nt)	PP_3294	universal stress protein family protein
	?	NC_002947	= 3728883	46 (0.970)					coding (754/891 nt)	PP_3294	universal stress protein family protein

CCTGCTCTCGGCTTACGACCTGCCCATCGCCATGCTGGCCAACCCTGACCTTGCCGGCCCTTGGGTAAACCAATTACGCGAGTCACTGCAGCTGCCTTTCGATGCGTTGGCCGATGCACATGGCATCGCCCACACGCACCGGCATTTCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3728693‑3728844 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttcagcgTGGCGATGTAGGACTTGATCACGCGCAGGGGCGCACCTTCGCTGAAATGCCGGTGCGTGTGGGCGATGCCATGTGCATCGGCCAACGCATCGAAAGGCAGCTGCAGTGACTCGCGTAATTGGTTTACCCAAGGGCCGGCAAGGTCAGG  <  NC_002947/3728883‑3728736                                                                                                                                                                                                                                                                                                              CCTGCTCTCGGCTTACGACCTGCCCATCGCCATGCTGGCCAACCCTGACCTTGCCGGCCCTTGGGTAAACCAATTACGCGAGTCACTGCAGCTGCCTTTCGATGCGTTGGCCGATGCACATGGCATCGCCCACACGCACCGGCATTTCA                                                                                                                                                         <  1:10607/149‑1  CTGCTCTCGGCTTACGACCTGCCCATCGCCATGCTGGCCAACCCTGACCTTGCCGGCCCTTGGGTAAACCAATTACGCGAGTCACTGCAGCTGCCTTTCGATGCGTTGGCCGATGCACATGGCATCGCCCACACGCACCGGCATTTCAG                                                                                                                                                        <  6:298377/149‑1     CTCTCGGCTTACGACCTGCCCATCGCCATGCTGGCCAACCCTGACCTTGCCGGCCCTTGGGTAAACCAATTACGCGAGTCACTGCAGCTGCCTTTCGATGCGTTGGCCGATGCACATGGCATCGCCCACACGCACCGGCATTTCAGC                                                                                                                                                       <  6:75549/147‑1             TTACGACCTGCCCATCGCCATGCTGGCCAACCCTGACCTTGCCGGCCCTTGGGTAAACCAATTACGCGAGTCACTGCAGCTGCCTTTCGATGCGTTGGCCGATGCACATGGCATCGCCCACACGCACCGGCATTTCAGCGTGGCGATG                                                                                                                                              >  8:154350/1‑148                                                        GGCCCTTGGGTAAACCAATTACGCGAGTCACTGCAGCTGCCTTTCGATGCGTTGGCCGATGCACATGGCATCGCCCACACGCACCGGCATTTCAGCGTGGCGATGTAGGACTTGATCACGCGCAGGGGCGCACCTTCGCTGAAATGCCG                                                                                                  <  7:154350/149‑1                                                                                                 TTTCGATGCGTTGGCCGATGCACATGGCATCGCCCACACGCACCGGCATTTCAGCGTGGCGATGTAGGACTTGATCACGCGCAGGGGCGCACCTTCGCTGAAATGCCGGT                                                                                                >  3:8914/1‑110                                                                                                 TTTCGATGCGTTGGCCGATGCACATGGCATCGCCCACACGCACCGGCATTTCAGCGTGGCGATGTAGGACTTGATCACGCGCAGGGGCGCACCTTCGCTGAAATGCCGGT                                                                                                <  4:8914/110‑1                                                                                                                                                  TTCAGCGTGGCGATGTAGGACTTGATCACGCGCAGGGGCGCACCTTCGCTGAAATGCCGGTGCGTGTGGGCGATGCCATGTGCATCGGCCAACGCATCGAAAGGCAGCTGCAGTGACTCGCGTAATTGGTTTACCCAAGGGCCGGCAA         <  7:28262/148‑1                                                                                                                                                    CAGCGTGGCGATGTAGGACTTGATCACGCGCAGGGGCGCACCTTCGCTGAAATGCCGGTGCGTGTGGGCGATGCCATGTGCATCGGCCAACGCATCGAAAGGCAGCTGCAGTGACTCGCGTAATTGGTTTACACAAGGGCCGGCAAGGT      >  2:234533/1‑149                                                                                                                                                      GCGTGGCGATGTAGGACTTGATCACGCGCAGGGGCGCACCTTCGCTGAAATGCCGGTGCGTGTGGGCGATGCCATGTGCATCGGCCAACGCATCGAAAGGCAGCTGCAGTGACTCGCGTAATTGGTTTACCCAAGGGCCG             <  1:33507/140‑1                                                                                                                                                      GCGTGGCGATGTAGGACTTGATCACGCGCAGGGGCGCACCTTCGCTGAAATGCCGGTGCGTGTGGGCGATGCCATGTGCATCGGCCAACGCATCGAAAGGCAGCTGCAGTGACTCGCGTAATTGGTTTACCCAAGGGCCG             >  2:33507/1‑140                                                                                                                                                        GTGGCGATGTAGGACTTGATCACGCGCAGGGGCGCACCTTCGCTGAAATGCCGGTGCGTGTGGGCGATGCCATGTGCATCGGCCAACGCATCGAAAGGCAGCTGCAGTGACTCGCGTAATTGGTTTACCCAAGGGCCGGCAAGGTCAGG  <  1:154308/149‑1                                                                                                                                                                                                                                                                                                              CCTGCTCTCGGCTTACGACCTGCCCATCGCCATGCTGGCCAACCCTGACCTTGCCGGCCCTTGGGTAAACCAATTACGCGAGTCACTGCAGCTGCCTTTCGATGCGTTGGCCGATGCACATGGCATCGCCCACACGCACCGGCATTTCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3728693‑3728844 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttcagcgTGGCGATGTAGGACTTGATCACGCGCAGGGGCGCACCTTCGCTGAAATGCCGGTGCGTGTGGGCGATGCCATGTGCATCGGCCAACGCATCGAAAGGCAGCTGCAGTGACTCGCGTAATTGGTTTACCCAAGGGCCGGCAAGGTCAGG  <  NC_002947/3728883‑3728736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.