New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3926238 | 39 (0.770) | 3 (0.060) | 3/240 | NT | 7.9% | coding (253/1629 nt) | peaA | quinohemoprotein amine dehydrogenase subunit alpha |
? | NC_002947 | = 3926260 | 34 (0.730) | coding (231/1629 nt) | peaA | quinohemoprotein amine dehydrogenase subunit alpha |
TATTGAGCCGACGCTCCATGGCGTAGCGCACGCCATCGGTTTCGCTGGGCGCCAGGCCCTGTTTGTCGGCCAGGTATTTGACCAGCGTGCGACGATCGTCGTCGCTGATCTGAAGGCCATGCATCACCTGCATGCGGGCGATGCTCATCAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3926085‑3926238 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcagccaCCAGCGCAAGACACCGGAAGGCTGGCTGATGAGCATCGCCCGCATGCAGGTGATGCATGGCCTTCAGATCAGCGACGACGATC‑GTCGCACGCTGGTCAAATACCTGGCCGACAAACAGGGCCTGGCGCCCAGCGAAACCGATG < NC_002947/3926260‑3926118 TATTGAGCCGACGCTCCATGGCGTAGCGCACGCCATCGGTTTCGCTGGGCGCCAGGCCCTGTTTGTCGGCCAGGTATTTGACCAGCGTGCGACGATCGTCGTCGCTGATCTGAAGGCCATGCATCACCTGCATGCGGGCGATGCTCAT > 6:36253/1‑148 TTGAGCCGACGCTCCATGGCGTAGCGCACGCCATCGGTTTCGCTGGGCGCCAGGCCCTGTTTGTCGGCCAGGTATTTGACCAGCGTGTGACGATCGTCGTCGCTGATCTGAAGGCCATGCAGAACCTGCATGCCGGCGATGCTCATCcg > 8:65513/1‑147 TGAGCCGACGCTCCATGGCGTAGCGCACGCCATCGGTTTCGCTGGGCGCCAGGCCCTGTTTGTCGGCCAGGTATTTGACCAGCGTGCGACGATCGTCGTCGCTGATCTGAAGGCCATGCATCACCTGCATGCGGGCGATGCTCATCAGC > 8:230126/1‑149 AGCCGACGCTCCATGGCGTAGCGCACGCCATCGGTTTCGCTGGGCGCCAGGCCCTGTTTGTCGGCCAGGTATTTGACCAGCGTGCGACGATCGTCGTCGCTGATCTGAAGGCCATGCATCACCTGCATGCGGGCGATGCTCATCAGCCA < 8:278728/149‑1 TCGGTTTCGCTGGGCGCCAGGCCCTGTTTGTCGGCCAGGTATTTGACCAGCGTGTGACGATCGTCGTCGCTGATCTGAAGTCCATGCATCACCTGCATGCGGGCGATGCTCATCAGCCACCAGCGCAAGACACCGGAAGGCTGGCTGAT < 7:65513/149‑1 CAGGCCCTGTTTGTCGGCCAGGTATTTGACCAGCGTGCGACGATCGTCGTCGCTGATCTGAAGGCCATGCATCACCTGCATGCGGGCGATGCTCATCAGCCACCAGCGCAAGACACCGGAAGGCTGGCTGATGA > 1:18422/1‑134 CAGGCCCTGTTTGTCGGCCAGGTATTTGACCAGCGTGCGACGATCGTCGTCGCTGATCTGAAGGCCATGCATCACCTGCATGCGGGCGATGCTCATCAGCCACCAGCGCAAGACACCGGAAGGCTGGCTGATGA < 2:18422/134‑1 ATCAGCCACCAGCGCAAGACACCGGAAGGCTGGCTGATGAGCATCGCCCGCATGCAGGTGATGCATGGCCTTCAGATCAGCGACGACGATCTTTCGCACGCTGGTCAAATACCTGGCCGACAAACAGGGCCTGGCGCCCAGCGAAACCG < 1:88349/149‑1 CAGCCACCAGCGCAAGACACCGGAAGGCTGGCTGATGAGCATCGCCCGCATGCAGGTGATGCATGGCCTTCAGATCAGCGACGACGATC‑GTCGCACGCTGGTCAAATACCTGGCCGACAAACAGGGCCTGGCGCCCAGC < 5:265124/139‑1 CAGCCACCAGCGCAAGACACCGGAAGGCTGGCTGATGAGCATCGCCCGCATGCAGGTGATGCATGGCCTTCAGATCAGCGACGACGATC‑GTCGCACGCTGGTCAAATACCTGGCCGACAAACAGGGCCTGGCGCCCAGC > 6:265124/1‑139 AGCCACCAGCGCAAGACACCGGAACGCTGGCGGATGAGCATCGCCCGCATGCAGGTGATGCATGGCCTTCAGATCAGCGACGACGATC‑GTCGCACGCTGGTCAAATACCTGGCCGACAAACAGGGCCTGGCGCCCAGCGAAACCGATG < 8:284253/148‑1 TATTGAGCCGACGCTCCATGGCGTAGCGCACGCCATCGGTTTCGCTGGGCGCCAGGCCCTGTTTGTCGGCCAGGTATTTGACCAGCGTGCGACGATCGTCGTCGCTGATCTGAAGGCCATGCATCACCTGCATGCGGGCGATGCTCATCAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3926085‑3926238 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcagccaCCAGCGCAAGACACCGGAAGGCTGGCTGATGAGCATCGCCCGCATGCAGGTGATGCATGGCCTTCAGATCAGCGACGACGATC‑GTCGCACGCTGGTCAAATACCTGGCCGACAAACAGGGCCTGGCGCCCAGCGAAACCGATG < NC_002947/3926260‑3926118 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |