New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4121685	38 (0.750)	6 (0.120)	6/248	NT	14.5%	coding (102/789 nt)	PP_3624	hypothetical protein
	?	NC_002947	= 4121700	34 (0.700)					coding (87/789 nt)	PP_3624	hypothetical protein

CCTGGGCTCGTGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4121534‑4121685 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcctACGGCTGACCGCCACAGGCAACCCGGAATACCCCCCGTACCTGTGGCGCGACCCGCTGAACCCTCAGCGACTGATCGGTGCCAATGCCGACCTGCTCAAATACCTGGGCAAGCAGTTGGGGCTGGAGATAGAGGTGGTTTACGC  <  NC_002947/4121700‑4121557                                                                                                                                                                                                                                                                                                          CCTGGGCTCGTGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTT                                                                                                                                                      <  5:303790/148‑1               CACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTACGGCTGACCG                                                                                                                                       >  2:37969/1‑149                           TAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTACGGCTGACCGCCACAGGCAACC                                                                                                                           <  1:37969/149‑1                             AACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTACGGGTTGCCTACGGCTGACCGCCACAGGCAACACG                                                                                                                         >  7:271511/1‑149                                      TATCTCCAGCCCCAAGTGCTTGCGCAGTTATTTGAGCAGGTCGGCATTGGCACCGATCTGTCGCTGAGGGTTCAGCGGGTGGCGCCACAGGTACGGGTGGTATTCGGGGTTGCCTACGGCTGACCGCCACAGGCAACCCGGAATACC                                                                                                                  <  8:271511/147‑1                                                                                                                                            TTCCGGGTTGCCTGTGGCGGTCAGCCGTAGGCAACCCGGAATACCCCCCGTACCTGTGGCGCGACCCGCTGAACCCTCAGCGA                                                                            <  3:27534/83‑1                                                                                                                                            TTCCGGGTTGCCTGTGGCGGTCAGCCGTAGGCAACCCGGAATACCCCCCGTACCTGTGGCGCGACCCGCTGAACCCTCAGCGA                                                                            >  4:27534/1‑83                                                                                                                                                    TGCCTACGGCTGACCGCCACAGGCAACCCGGAATACCCCCCGTACCTGTGGCGCGACCCGCTGAACCCTCAGCGACTGATCGGTGCCAATGCCGACCTGCTCAAATACCTGGGCAAGCAGTTGGGGCTGGAGATAGAGGTGGTTTACGC  <  4:129881/149‑1                                                                                                                                                                                                                                                                                                          CCTGGGCTCGTGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4121534‑4121685 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcctACGGCTGACCGCCACAGGCAACCCGGAATACCCCCCGTACCTGTGGCGCGACCCGCTGAACCCTCAGCGACTGATCGGTGCCAATGCCGACCTGCTCAAATACCTGGGCAAGCAGTTGGGGCTGGAGATAGAGGTGGTTTACGC  <  NC_002947/4121700‑4121557

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.