New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4247363	43 (0.850)	3 (0.060)	3/244	NT	6.9%	coding (554/1608 nt)	aruI	2‑ketoarginine decarboxylase AruI
	?	NC_002947	= 4247385	40 (0.840)					coding (532/1608 nt)	aruI	2‑ketoarginine decarboxylase AruI

GAACAGAGGCGCTGCCAGCCGTGTACTGAGTTGCTGCAACTGCTCAGCCGCGTGCAACGCGCCACCCCCGGCAATGATCATAGGCCGCTGGGCGGCGGCAAGCTTCAGGGCAGCCTGCTCGAGGGTTTCGCGGCACGGCTGGCCACGCCCGGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4247209‑4247363 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggacTGGAGCGGTGAGGTGGTACGCCGTCCCGGGCGTGGCCAGCCGTGCCGCGAAACCCTCGAGCAGGCTGCCCTGAAGCTTGCCGCCGCCCAGCGGCCTATGATCATTGCCGGGGGTGGCGCGTTGCACGCGGCTGAGCAGTTGCAGCAA  <  NC_002947/4247385‑4247239                                                                                                                                                                                                                                                                                                                GAACAGAGGCGCTGCCAGCCGTGTACTGAGTTGCTGCAACTGCTCAGCCGCGTGCAACGCGCCACCCCCGGCAATGATCATAGGCCGCTGGGCGGCGGCAAGCTTCAGGGCAGCCTGCTCGAGGGTTTCGCGGCACGGCTGGCCACGCC                                                                                                                                                           >  2:259862/1‑149      GAGGCGCTGCCAGCCGTGTACTGAGTTGCTGCAACTGCTCAGCCGCGTGCAACGCGCCACCCCCGGCAATGATCATAGGCCGCTGGGCGGCGGCAAGCTTCAGGGCAGCCTGCTCGAGGGTTTCGCGGCACGGCTGGCCACGCCCGGGA                                                                                                                                                      <  4:273527/149‑1                                           CTCAGCCGCGTGCAACGCGCCACCCCCGGCAATGATCATAGGCCGCTGGGCGGCGGCAAGCTTCAGGGCAGCCTGCTCGAGGGTTTCGCGGCACGGCTGGCCACGCCCGGGACTGGAGCGGTGAGGTGGTACGCCGTCCCGGGCGTGG                                                                                                                  <  2:281707/148‑1                                                        AACGCGCCACCCCCGGCAATGATCATAGGCCGGTGGGCGGCGGCAAGCTTCAGGGCAGCCTGCTCGAGGGTTTCGCGGCACGGCTGGCCACGCCCGGGACTGGAGCGGTGAGGTGGTACGCCGTCCCGGGCG                                                                                                                     <  3:290735/132‑1                                                        AACGCGCCACCCCCGGCAATGATCATAGGCCGCTGGGCGGCGGCAAGCTTCAGGGCAGCCTGCTCGAGGGTTTCGCGGCACGGCTGGCCACGCCCGGGACTGGAGCGGTGAGGTGGTACGCCGTCCCGGGCG                                                                                                                     >  4:290735/1‑132                                                                                                                                                      CGGGACTGGAGCGGTGAGGTGGTACGCCGTCCCGGGCGTGGCCAGCCGTGCCGCGAAACCCTCGAGCAGGCTG‑CCTGAAGCTTGCCGCCGCCCAGCGGCCTATGATCATTGCCGGGGGTGGCGCGTTGCACGCGGCTGAGCAGTTGCAG     >  1:251225/1‑149                                                                                                                                                       GGGACTGGAGCGGTGAGGTGGTACGCCGTCCCGGGCGTGGCCAGCCGTGCCGCGAAACCCTCGAGCAGGCTGCCCTGAAGCTTGCCGCCGCCCAGCGGCCTATGATCATTGCCGGGGGTGGCGCGTTGCACGCGGCTGAG              >  3:274595/1‑140                                                                                                                                                       GGGACTGGAGCGGTGAGGTGGTACGCCGTCCCGGGCGTGGCCAGCCGTGCCGCGAAACCCTCGAGCAGGCTGCCCTGAAGCTTGCCGCCGCCCAGCGGCCTATGATCATTGCCGGGGGTGGCGCGTTGCACGCGGCTGAG              <  4:274595/140‑1                                                                                                                                                          ACTGGAGCGGTGAGGTGGTACGCCGTCCCGGGCGTGGCCAGCCGTGCCGCGAAACCCTCGAGCAGGCTGCCCTGAAGCTTGCCGCCGCCCAGCGGCCTATGATCATTGCCGGGGGTGGCGCGTTGCACGCGGCTGAGCAGTTGCAGCAA  <  7:261158/149‑1                                                                                                                                                                                                                                                                                                                GAACAGAGGCGCTGCCAGCCGTGTACTGAGTTGCTGCAACTGCTCAGCCGCGTGCAACGCGCCACCCCCGGCAATGATCATAGGCCGCTGGGCGGCGGCAAGCTTCAGGGCAGCCTGCTCGAGGGTTTCGCGGCACGGCTGGCCACGCCCGGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4247209‑4247363 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggacTGGAGCGGTGAGGTGGTACGCCGTCCCGGGCGTGGCCAGCCGTGCCGCGAAACCCTCGAGCAGGCTGCCCTGAAGCTTGCCGCCGCCCAGCGGCCTATGATCATTGCCGGGGGTGGCGCGTTGCACGCGGCTGAGCAGTTGCAGCAA  <  NC_002947/4247385‑4247239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.