New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4249328	43 (0.850)	3 (0.060)	3/246	NT	6.3%	coding (699/2118 nt)	PP_3724	acyl‑CoA synthetase
	?	NC_002947	= 4249399	48 (1.000)					coding (628/2118 nt)	PP_3724	acyl‑CoA synthetase

ACAAAGCTCACCGGGCCGCTGACGCGGATCACGCCCAGGCGCTGGAACAGGCTGTCGTACAACGCATCGGAGCCGGACAACGAGCTGGTGTGGCTGAGCGCCAGTTCAGCGCCGATCTGCGAAACGCCCGTCTTCAATGCAATGATCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4249179‑4249328 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcggcCTGCACCTGGAAGGCTTGAAGAACGTGCCGGGCTTTGCCCGCGCCGCTTGCAAGGCGCTGCAGCAGGGCACGCCGATCATTGCATTGAAGACGGGCGTTTCGCAGATCGGCGCTGAACTGGCGCTCAGCCACACCAGCTCGTT  <  NC_002947/4249399‑4249257                                                                                                                                                                                                                                                                                                       ACAAAGCTCACCGGGCCGCTGACGCGGATCACGCCCAGGCGCTGGAACAGGCTGTCGTACAACGCATCGGAGCCGGACAACGAGCTGGTGTGGCTGAGCGCCAGTTCAGCGCCGATCTGCGAAACGCCCGTCTTCAATGCAATGATCGG                                                                                                                                                  >  8:233319/1‑149    AAGCTCACCGGGCCGCTGACGCGGATCACGCCCAGGCGCTGGAACAGGCTGTCGTACAACGCATCGGAGCCGGACAACGAGCTGGTGTGGCTGAGCGCCAGTTCAGCGCCGATCTGCGAAACGCCCGTCTTCAATGCAATGATCGG                                                                                                                                                  >  1:138083/1‑146    AAGCTCACCGGGCCGCTGACGCGGATCACGCCCAGGCGCTGGAACAGGCTGTCGTACAACGCATCGGAGCCGGACAACGAGCTGGTGTGGCTGAGCGCCAGTTCAGCGCCGATCTGCGAAACGCCCGTCTTCAATGCAATGATCGG                                                                                                                                                  <  2:138083/146‑1                                                                  ATCGGAGCCGGACAACGAGCTGGTGTGGCTGAGCGCCAGTTCAGCGCCGATCTGCGAAACGCCCGTCTTCAATGCAATGATCGGCCTGCACCTGGAAGGCTTGAAGAACGTGCCGGGCTTTGCCCGCGCCGCTTGCAAGGCGCTGCAG                                                                                  >  3:172243/1‑148                                                                                   AGCTGGTGTGGCTGAGCGCCAGTTCAGCGCCGATCTGCGAAACGCCCGTCTTCAATGCAATGATCGGCCTGCACCTGGAAGGCTTGAAGAACGTGCCGGGCTTTGCCCGCGCCGCTTGCAAGGCGCTGCAGCAGGGCACGCCGATCATT                                                                <  1:15048/149‑1                                                                                    GCTGGTGTGGCTGAGCGCCAGTTCAGCGCCGATCTGCGAAACGCCCGTCTTCAATGCAATGATCGGCCTGCACCTGGAAGGCTTGAAGAACGTGCCGGGCTTTGCCCGCGCCGCTTGCAAGGCGCTGCAGCAGGGCACGCCGATCATTG                                                               <  4:172243/149‑1                                                                                                                                                 ATCGGCCTGCACCTGGAAGGCTTGAAGAACGTGCCGGGCTTTGCCCGCGCCGCTTGCAAGGCGCTGCAGCAGGGCACGCCGATCATTGCATTGAAGACGGGCGTTTCGCAGATCGGCGCTGAACTGGCGCTCAGCCACACCAGCTCGTT  <  4:177489/149‑1                                                                                                                                                                                                                                                                                                       ACAAAGCTCACCGGGCCGCTGACGCGGATCACGCCCAGGCGCTGGAACAGGCTGTCGTACAACGCATCGGAGCCGGACAACGAGCTGGTGTGGCTGAGCGCCAGTTCAGCGCCGATCTGCGAAACGCCCGTCTTCAATGCAATGATCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4249179‑4249328 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcggcCTGCACCTGGAAGGCTTGAAGAACGTGCCGGGCTTTGCCCGCGCCGCTTGCAAGGCGCTGCAGCAGGGCACGCCGATCATTGCATTGAAGACGGGCGTTTCGCAGATCGGCGCTGAACTGGCGCTCAGCCACACCAGCTCGTT  <  NC_002947/4249399‑4249257

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.