New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4352363	38 (0.750)	3 (0.060)	3/246	NT	7.0%	coding (21/303 nt)	PP_3825	hypothetical protein
	?	NC_002947	= 4352407	44 (0.920)					coding (65/303 nt)	PP_3825	hypothetical protein

CTTCGACCACATCCAGGCGGTTTTGCTCCCTGCTTTGGCAGAATTATCTACGCCCGGCGATCAACGCGGCAGTGTAACGGCACATCGTGGTATCTTTTGCTTTTGCAGATCCAAACCTTGCGGAGCATCACATGAAATTCGTACACCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4352212‑4352363 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcTGGGAGCACTCGATGACGACAATATCGTCCTCGTTGAGGTGCTCGCGCTGGTGTACGAATTTCATGTGATGCTCCGCAAGGTTTGGATCTGCAAAAGCAAAAGATACCACGATGTGCCGTTACACTGCCGCGTTGATCGCCGGGCG  <  NC_002947/4352407‑4352262                                                                                                                                                                                                                                                                                                            CTTCGACCACATCCAGGCGGTTTTGCTCCCTGCTTTGGCAGAATTATCTACGCCCGGCGATCAACGCGGCAGTGTAACGGCACATCGTGGTATCTTTTGCTTTTGCAGATCCAAACCTTGCGGAGCATCACATGAAATTCGTACACCAG                                                                                                                                                       >  3:204364/1‑149                                      GCAGAATTATCTACGCCCGGCGATCAACGCGGCAGTGTAACGGCACATCGTGGTATCTTTTGCTTTTGCAGATCCAAACCTTGCGGAGCATCACATGAAATTCGTACACCAGCGCTGGGAGCACTCGATGACGACAATATCGTCCTCGT                                                                                                                  >  8:109036/1‑149                                                        GGCGATCAACGCGGCAGTGTAACGGCACATCGTGGTATCTTTTGCTTTTGCAGATCCAAACCTTGCGGAGCATCACATGAAATTCGTACACCAGCGCTGGGAGCACTCGATGACGACAATATCGTCCTCGTTGAGGTGCTCGCGCTGGT                                                                                                <  7:109036/149‑1                                                           GATCAACGCGGCAGTGTAACGGCACATCGTGGTATCTTTTGCTTTTGCAGATCCAAACCTTGCGGAGCATCACATGAAATTCGTACACCAGCGCTGGGAGCACTCGATGACGACAATATCGTCCTCGTTGAGGTGCTCGCGCTGGTGTA                                                                                             <  5:193429/149‑1                                                                                                                                                     GCGCTGGGAGCACTCGATGACGACAATATCGTCCTCGTTGAGGTGCTCGCGCTGGTGTACGAATTTCATGTGATGCTCCGCAAGGTTTGGATCTGCAAAAGCAAAAGATACCACGATGTGCCGTTACACTGCCGCGTTGATCGCCGGGC   <  1:1933/149‑1                                                                                                                                                      CGCTGGGAGCACTCGATGACGACAATATCGTCCTCGTTGAGGTGCTCGCGCTGGTGTACGAATTTCATGTGATGCTCCGCAAGGTTTGGATCTGCAAAAGCAAAAGATACCACGATGTGCCGTTACCCTGCCGCGTTGATCGCCGGGCG  >  8:234028/1‑149                                                                                                                                                        CTGGGAGCACTCGATGACGACAATATCGTCCTCGTTGAGGTGCTCGCGCTGGTGTACGAATTTCATGTGATGCTCCGCAAGGTTTGGATCTGCAAAAGCAAAAGATACCACGATGTGCCGTTACACTGACGCGTTGATCGCCGGGCG  >  3:78573/1‑147                                                                                                                                                                                                                                                                                                            CTTCGACCACATCCAGGCGGTTTTGCTCCCTGCTTTGGCAGAATTATCTACGCCCGGCGATCAACGCGGCAGTGTAACGGCACATCGTGGTATCTTTTGCTTTTGCAGATCCAAACCTTGCGGAGCATCACATGAAATTCGTACACCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4352212‑4352363 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcTGGGAGCACTCGATGACGACAATATCGTCCTCGTTGAGGTGCTCGCGCTGGTGTACGAATTTCATGTGATGCTCCGCAAGGTTTGGATCTGCAAAAGCAAAAGATACCACGATGTGCCGTTACACTGCCGCGTTGATCGCCGGGCG  <  NC_002947/4352407‑4352262

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.