| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4578324 = | 47 (0.930) | 4 (0.080) | 4/242 | NT | 10.1% | coding (1787/2211 nt) | glgB | 1,4‑alpha‑glucan branching enzyme |
| ? | NC_002947 | 4578364 = | 27 (0.570) | coding (1747/2211 nt) | glgB | 1,4‑alpha‑glucan branching enzyme | |||||
GCTGATCGACAAGATGCCCGGCGACCGCTGGCAGAAGTTCGCCAACCTGCGTGCCTACCTCACCTTCATGTGGGCACACCCGGGCAAGAAGCTGCTGTTCATGGGCTGCGAGTTCGGCCAGTGGCGTGAGTGGAACCACGACGCCGAACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4578473‑4578324‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaactCGCAGCCCATGAACAGCAGCTTCTTGCCCGGGTGTGCCCACATGAAGGTGAGGTAGGCACGCAGGTTGGCGAACTTCTGCCAGCGGTCGCCGGGCATCTTGTCGATCAGCGAATGCTTGCCGTGCACCACCTCATCATGGGAAATGGG > NC_002947/4578364‑4578511 GCTGATCGACAAGATGCCCGGCGACCGCTGGCAGAAGTTCGCCAACCTGCGTGCCTACCTCACGTTCATGTGGGCACACCCGGGCAAGAAGCTGCTGTTCATGGGCTGCGAGTTCGGCCAGTGGCGTGAGTGGAACCACGACGCCGAA < 6:63017/148‑1 GAGTTCGGCCAGTGGCGTGAGTGGAACCACGACGCCGAACTCGCAGCCCATGAACAGCAGCTTCTTGCCCGGGTGTGCCCACATGAAGGTGAGGTAGGCACGCAGGTTGGCGAACTTCTGCCAGCGGTCGCCGGGCATCTTGTCGAT > 2:183686/1‑147 GGCCAGTGGCGTGAGTGGAACCACGACGCCGAACTCGCAGCCCATGAACAGCAGCTTCTTGCCCGGGTGTGCCCACATGAAGGTGAGGTAGGCACGCAGGTTGGCGAA < 3:145487/108‑1 GGCCAGTGGCGTGAGTGGAACCACGACGCCGAACTCGCAGCCCATGAACAGCAGCTTCTTGCCCGGGTGTGCCCACATGAAGGTGAGGTAGGCACGCAGGTTGGCGAA > 4:145487/1‑108 GCCAGTGGCGTGAGTGGAACCACGACGCCGAACTCGCAGCCCATGAACAGCAGCTTCTTGCCCGGGTGTGCCCACATGAAGGTGAGGTAGGCACGCAGGTTGGCGAACTTCTGCCAGCGGTCGCCGGGCATCTTGTCGATCAGCGAATG < 1:183686/149‑1 CCGAACTCGCAGCCCATGAACAGCAGCTTCTTGCCCGGGTGTGCCCACATGAAGGTGAGGTAGGCACGCAGGTTGGCGAACTTCTGCCAGCGGTCGCCGGGCATCTTGTCGATCAGCG > 5:172645/1‑118 CCGAACTCGCAGCCCATGAACAGCAGCTTCTTGCCCGGGTGTGCCCACATGAAGGTGAGGTAGGCACGCAGGTTGGCGAACTTCTGCCAGCGGTCGCCGGGCATCTTGTCGATCAGCG < 6:172645/118‑1 ACTCGCAGCCCATGAACAGCAGCTTCTTGCCCGGGTGTGCCCACATGAAGGTGAGGTAGGCACGCAGGTTGGCGAACTTCTGCCAGCGGTCGCCGGGCATCTTGTCGATCAGCGAATGCTTGCCGTGCACCACCTCATCATGGGAAATG < 2:64417/149‑1 TCGCAGCCCATGAACAGCAGCTTCTTGCCCGGGTGTGCCCACATGAAGGTGAGGTAGGCACGCAGGTTGGCGAACTTCTGCCAGCGGTCGCCGGGCATCTTGTCGATCAGCGAATGCTTGCCGTGCACCACCTCATCATGGGAAATGGG > 7:13937/1‑149 GCTGATCGACAAGATGCCCGGCGACCGCTGGCAGAAGTTCGCCAACCTGCGTGCCTACCTCACCTTCATGTGGGCACACCCGGGCAAGAAGCTGCTGTTCATGGGCTGCGAGTTCGGCCAGTGGCGTGAGTGGAACCACGACGCCGAACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4578473‑4578324‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaactCGCAGCCCATGAACAGCAGCTTCTTGCCCGGGTGTGCCCACATGAAGGTGAGGTAGGCACGCAGGTTGGCGAACTTCTGCCAGCGGTCGCCGGGCATCTTGTCGATCAGCGAATGCTTGCCGTGCACCACCTCATCATGGGAAATGGG > NC_002947/4578364‑4578511 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |