New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4625506	43 (0.850)	3 (0.060)	3/242	NT	6.6%	intergenic (+4099/+465)	PP_5654/PP_4091	phosphotriesterase/transposase
	?	NC_002947	= 4625534	45 (0.950)					intergenic (+4127/+437)	PP_5654/PP_4091	phosphotriesterase/transposase

GCTACGACGCGGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4625357‑4625506 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgctggTCGGGCAGCACCAGGGTCTGCAAATTGCCCAGCGCGTCGTAGCGGTACTGCAGCAGGCCCGCGCTGTTGGTTTCGCTGAGCAGTTGCCCGTTGGGGTCGTAGGTGTAATCGAGTTGCTGCTTCTTGCCCTGGTTGTCTGTGAAGGTGA  <  NC_002947/4625534‑4625387                                                                                                                                                                                                                                                                                                            GCTACGACGCGGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTG                                                                                                                                                       <  1:33613/149‑1                  AATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTG                                                                                                                                                       <  7:40628/132‑1                  AATCTGCTGTCAATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTG                                                                                                                                                       >  8:40628/1‑132                                                CAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGTCGGGCAGCACCAGGGTCTGCAAATTGCCCAGCGC                                                                                                                   >  7:112312/1‑138                                                CAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGTCGGGCAGCACCAGGGTCTGCAAATTGCCCAGCGC                                                                                                                   <  8:112312/138‑1                                                   GGCAAGATCCATCAAATCGATTACTCATACGACCCCAACGGGCAACTGCTCAGCGAAACCTACACTGCGGGCCTGCTGCTGTACCGCTACGACGCGCTGGTCGGGCAGCACCAGGGTCTGCAAATTGCCCAGCGCGTCGTAGCGGTACT                                                                                                     <  8:115462/149‑1                                                                                                                                                GCGCTGGTCGGGCAGCACCAGGGTCTGCAAATTGCCCAGCGCGTCGTAGCGGTACTGCAGCAGGCCCGCGCTGTTGGTTTCGCTGAGCAGTTGCCCGTTGGGGTCGTAGGTGTAATCGAGTTGCTGCTTCTTGCCCTGGTTGTCTGTG         >  5:123746/1‑148                                                                                                                                                GCGCTGGTCGGGCAGCACCAGGGTCTGCAAATTGCCCAGCGCGTCGTAGCGGTACCGCAGCAGGCCCGCGCTGTTGGTTTCGCTGAGCAGTTGCCCGTTGGGGTCGTAGGTGTAATCGAGTTGCTGCTTCTTGCCCTGGTTGTCTGTG         >  7:126213/1‑148                                                                                                                                                      GTCGGGCAGCACCAGGGTCTGCAAATTGCCCAGCGCGTCGTAGCGGTACTGCAGCAGGCCCGCGCTGTTGGTTTCGCTGAGCAGTTGCCCGTTGGGGTCGTAGGTGTAATCGAGTTGCTGCTTCTTGCCCTGGTTGTCTGTGAAGGTGA  >  1:18784/1‑149                                                                                                                                                                                                                                                                                                            GCTACGACGCGGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4625357‑4625506 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgctggTCGGGCAGCACCAGGGTCTGCAAATTGCCCAGCGCGTCGTAGCGGTACTGCAGCAGGCCCGCGCTGTTGGTTTCGCTGAGCAGTTGCCCGTTGGGGTCGTAGGTGTAATCGAGTTGCTGCTTCTTGCCCTGGTTGTCTGTGAAGGTGA  <  NC_002947/4625534‑4625387

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.