New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4625506 | 43 (0.850) | 3 (0.060) | 3/242 | NT | 6.6% | intergenic (+4099/+465) | PP_5654/PP_4091 | phosphotriesterase/transposase |
? | NC_002947 | = 4625534 | 45 (0.950) | intergenic (+4127/+437) | PP_5654/PP_4091 | phosphotriesterase/transposase |
GACGCGGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGCCGGGTGATCAGCGATTTCGAGCGCGATGCGGTGCACGACGAGGTCCTGCGCACCCA > NC_002947/4625362‑4625654 | gacgCGGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCACCAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCaa < 7:139722/149‑1 (MQ=255) gcgGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGAACCGCTACGACGCGCTGGGCCAttt > 8:182811/1‑149 (MQ=255) cgGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGTAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTg < 1:258651/149‑1 (MQ=255) gCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCa < 4:110778/149‑1 (MQ=255) tCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTgg > 3:34902/1‑149 (MQ=255) ctgTCCATCGCCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACACCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCGGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGtgct > 8:126213/1‑149 (MQ=255) cATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGAccc > 7:230455/1‑137 (MQ=255) cATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGAccc < 8:230455/137‑1 (MQ=255) aTCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGCCCCTGGTGCTGCCCgc > 8:150871/1‑148 (MQ=255) tCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGAc > 1:18784‑M2/1‑148 (MQ=255) cTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGc > 8:65236/1‑118 (MQ=255) cTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGc < 7:65236/118‑1 (MQ=255) cacaGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCGGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGAccagcgc > 7:126213‑M2/1‑141 (MQ=255) cacaGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGAccagcgc > 5:123746‑M2/1‑141 (MQ=255) caGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GCAACCAACAGCGCGGGCCTGCTGCAGTACAGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGaa > 2:284383/1‑149 (MQ=255) aaCCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCAGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTc > 1:254024/1‑148 (MQ=255) aaCCAGGGCAAGAAGCAGCAACTCGATTACACATACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCaa > 4:197938/1‑149 (MQ=255) cAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGtcgggcagcaccagggtctgcaaattgcccagcgc < 8:112312‑M1/138‑36 (MQ=255) cAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGtcgggcagcaccagggtctgcaaattgcccagcgc > 7:112312‑M1/1‑103 (MQ=255) aGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCAc < 8:124238/149‑1 (MQ=255) gggCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCAcc > 4:25206/1‑149 (MQ=255) ggCAAGATCCATCAAATCGATTACTCATACGACCCCAACGGGCAACTGCTCAGC‑GAAACCTACACTGCGGGCCTGCTGCTGTACCGCTACGACGCGCTGGtcgggcagcaccagggtctgcaaattgcccagcgcgtcgtagcggtact < 8:115462‑M1/149‑50 (MQ=255) cAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTg > 3:97901/1‑148 (MQ=255) agcagcAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTGCCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGtactac < 7:186395/149‑1 (MQ=255) cagcaACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACgg < 3:97711/149‑1 (MQ=255) gATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGaca < 3:25206/149‑1 (MQ=255) acacCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTg > 1:28577/1‑149 (MQ=255) acCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCa > 4:135424/1‑149 (MQ=255) aCGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCAc > 4:295689/1‑146 (MQ=255) cGACCCCACCGGCCACCTGCTCCGC‑GACACCCACAGCGCGGGCCTGCTGCACTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGa < 8:240387/149‑1 (MQ=17) cGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGa < 4:97901/149‑1 (MQ=255) cTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGCCg > 2:16958/1‑149 (MQ=255) cTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGCCggg < 2:254024/148‑1 (MQ=255) tCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGCCGGGt > 2:156894/1‑148 (MQ=255) aaCAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGc < 6:331844/132‑1 (MQ=255) aaCAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGc > 5:331844/1‑132 (MQ=255) aCAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGCCGGGTGATCAGCGATTTc < 1:156894/149‑1 (MQ=255) aCAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGCCGGGTGATCAGCGATTTc < 1:16958/149‑1 (MQ=255) aGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGCCGGGTGATCAGCGATTTCGa < 1:266280/149‑1 (MQ=255) cgcgGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGCCGGGTGATCAGCGATTTCGAgc > 6:272246/1‑149 (MQ=255) ctgcAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGCCGGGTGATCAGCGATTTCGAGCGCGATGCGGt > 6:282125/1‑149 (MQ=255) gcAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCAc > 6:188784/1‑97 (MQ=255) gcAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCAc < 5:188784/97‑1 (MQ=255) gcAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGCCGGGTGATCAGCGATTTCGAGCGCGATGCGGTg > 1:177600/1‑148 (MQ=255) cAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGCCGGGTGATCAGCGATTTCGAGCGCGATGCGGTg < 3:295689/147‑1 (MQ=255) aGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGAccagcgcgtcgtagcggtacagcagcaggcccgcagtgtaggtttcgctgagcagttgcccgttggggtcgtatgagtaatcgatttgatggatcttgcc < 8:115462‑M2/149‑101 (MQ=255) cGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGCCGGGTGATCAGCGATTTCGAGCGCGATGCGGTGCAcgacga < 3:135424/149‑1 (MQ=255) cTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGCCGGGTGATCAGCGATTTCGAGCGCGATGCGGTGCACGACGAgg < 7:189810/149‑1 (MQ=255) acgacgCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGCCGGGTGATCAGCGAt < 8:83941/119‑1 (MQ=255) acgacgCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGCCGGGTGATCAGCGAt > 7:83941/1‑119 (MQ=255) cgacgCGCGGGGCAATTTGCAGACCCTGCGGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGCCGGGTGATCAGCGATTTCGAGCGCGATGCGGTGCACGACGAGGTc < 1:284383/148‑1 (MQ=255) cgcgCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGCCGGGTGATCAGCGATTTCGAGCGCGATGCGGTGCACGACGAGGTCCt < 2:91552/147‑1 (MQ=255) cgcgCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGCCGGGTGATCAGCGATTTCGAGCGCGATGCGGTGCACGACGAGGTCCt > 1:91552/1‑147 (MQ=255) gcgcTGGtcgggcagcaccagggtctgcaaattgcccagcgcgtcgtagcggtactgcagcaggcccgcgctgttggtttcgctgagcagttgcccgttggggtcgtaggtgtaatcgagttgctgcttcttgccctggttgtctgtg > 5:123746‑M1/1‑7 (MQ=255) gcgcTGGtcgggcagcaccagggtctgcaaattgcccagcgcgtcgtagcggtaccgcagcaggcccgcgctgttggtttcgctgagcagttgcccgttggggtcgtaggtgtaatcgagttgctgcttcttgccctggttgtctgtg > 7:126213‑M1/1‑7 (MQ=255) gcgcTGGGCAATTTGCAGACCCTGGTGCTGCCCGAccagcgcgtcgtagcggtactgcagcaggcccgcgctgttggtttcgctgagcagttgcccgttggggtcgtaggtgtaatcgagttgctgcttcttgccctg < 8:112312‑M2/138‑104 (MQ=255) gcgcTGGGCAATTTGCAGACCCTGGTGCTGCCCGAccagcgcgtcgtagcggtactgcagcaggcccgcgctgttggtttcgctgagcagttgcccgttggggtcgtaggtgtaatcgagttgctgcttcttgccctg > 7:112312‑M2/1‑35 (MQ=255) tGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAg < 4:170035/80‑1 (MQ=255) tGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAg > 3:170035/1‑80 (MQ=255) gtcgggcagcaccagggtctgcaaattgcccagcgcgtcgtagcggtactgcagcaggcccgcgctgttggtttcgctgagcagttgcccgttggggtcgtaggtgtaatcgagttgctgcttcttgccctggttgtctgtgaaggtga > 1:18784‑M1/1‑1 (MQ=255) ggCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGCCGGGTGATCAGCGATTTCGAGCGCGATGCGGTGCACGACGAGGTCCTGCGCAccc > 5:282462/1‑148 (MQ=255) | GACGCGGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGC‑GAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGGCAATTTGCAGACCCTGGTGCTGCCCGACCAGCGCGAACTCAATCACCTGTACTACGGCAGCGGACACCTGCACCAGATCAACTTGAACGGCCGGGTGATCAGCGATTTCGAGCGCGATGCGGTGCACGACGAGGTCCTGCGCACCCA > NC_002947/4625362‑4625654 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |