| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4702830 | 34 (0.680) | 4 (0.080) | 4/252 | NT | 10.5% | coding (630/2055 nt) | kdpB | K+ transporting ATPase subunit KdpB |
| ? | NC_002947 | = 4702864 | 35 (0.710) | coding (596/2055 nt) | kdpB | K+ transporting ATPase subunit KdpB | |||||
GGAAAATCAGGGTCAGGCCGATCAGCAGGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4702751‑4702830‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accCGGGCGAGTCGACCCTGGACCGCATGATCGCCCTGGTCGAAGGTGCCAAGCGGCAGAAGACCCCAAACGAAATCGCCCTCGACATCCTGCTGATCGGCCTGACCCTGATTTTCCTGATCGTGGTGGTGACCTTGCAGCCGTTCGCC < NC_002947/4702864‑4702719 GGAAAATCAGGGTCAGGCCGATCAGCAGGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACCCGGGCGAGTCGACCCTGGACCGCATGATCGCCCTGGTC < 1:21395/118‑1GGAAAATCAGGGTCAGGCCGATCAGCAGGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACCCGGGCGAGTCGACCCTGGACCGCATGATCGCCCTGGTC > 2:21395/1‑118 ATCAGGGTCAGGCCGATCAGCAGGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACCCGGGCGAGTCGACCCTGGACCGCATGATCGCCCTGGT > 7:71785/1‑112 ATCAGGGTCAGGCCGATCAGCAGGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACCCGGGCGAGTCGACCCTGGACCGCATGATCGCCCTGGT < 8:71785/112‑1 ACCCGGGCGAGTCGACCCTGGACCGCATGATCGCCCTGGTCGAAGGTGCCAAGCGGCAGAAGACCCCAAACGAAATCGCCCTCGACATCCTGCTGATCGGCCTGACCCTGATTTTCCTGATCGTGGTGGTGACCTTGCAGCCGTTCGCC < 7:17974/149‑1 CCCGGGCGAGTCGACCCTGGACCTCATGATAGCCCTGGTCGTAGGTGCCAAGCGGCAGAAGACCCCAAACGAAATCGCGCTCGACATCCTGCTGATCGGCCTGACCCTGATTTTCCTGATCGTGGTGGTGACCTTGCAGCCGTTCG < 2:63269/146‑1 CCCGGGCGAGTCGACCATGGACCGCATGATCGCCCTGGTCGAAAGTGCCAAGCGGCAGAAGACCCCAAACGAAAAAGCCCTCGACATCCTGCTGATCGGCCTGACCCTGATATTCATGATCGTGGTGGTGACCTTGCAGCCGTTCGaa > 1:63269/1‑146 GGAAAATCAGGGTCAGGCCGATCAGCAGGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4702751‑4702830‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accCGGGCGAGTCGACCCTGGACCGCATGATCGCCCTGGTCGAAGGTGCCAAGCGGCAGAAGACCCCAAACGAAATCGCCCTCGACATCCTGCTGATCGGCCTGACCCTGATTTTCCTGATCGTGGTGGTGACCTTGCAGCCGTTCGCC < NC_002947/4702864‑4702719 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |