New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4702830	34 (0.680)	4 (0.080)	4/252	NT	10.5%	coding (630/2055 nt)	kdpB	K+ transporting ATPase subunit KdpB
	?	NC_002947	= 4702864	35 (0.710)					coding (596/2055 nt)	kdpB	K+ transporting ATPase subunit KdpB

GGGCGAACGGCTGCAAGGTCACCACCACGATCAGGAAAATCAGGGTCAGGCCGATCAGCAGGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCACCGCCGAGCGGTCGCCACCTGATTCGCGTATTACCGGTGCGGATTCGCCGGTAATGGCGGCCTCGTTGACGGCCGCAATGCCTT  >  NC_002947/4702718‑4703005                                                                                                                                                   |                                                                                                                                              gggCGAACGGCTTGAATGTCACCACCTCGATCAGGAAAATGAGGTTCAGGCCGATCAGCAGGATGTCGAGGGCTATTTCGTTTGGGTGCTTCTGCCGCTTGGCACCTTCGACGATGGCGATCATGCGGTCCTGGGTCGACTCGCCCggg                                                                                                                                             <  4:2685/149‑1 (MQ=255)  ttcgaACGGCTGCAAGGTCACCACCACGATCATGAATATCAGGGTCAGGCCGATCAGCAGGATGTCGAGGGCTTTTTCGTTTGGGGTCTTCTGCCGCTTGGCACTTTCGACCAGGGCGATCATGCGGTCCATGGTCGACTCGCCCGgg                                                                                                                                             >  1:63269‑M2/3‑146 (MQ=255)  ggCGAACGGCTGCAAGGTCACCACCACGATCAGGAAAATCAGGGTCAGGCCGATCAGCAGGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGggt                                                                                                                                            <  7:17974‑M2/149‑4 (MQ=255)    cGAACGGCTGCAAGGTCACCACCACGATCAGGAAAATCAGGGTCAGGCCGATCAGCAGGATGTCGAGCGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTACGACCAGGGCTATCATGAGGTCCAGGGTCGACTCGCCCGgg                                                                                                                                             <  2:63269‑M2/146‑3 (MQ=255)        cggcggCAAGGTCACCACCACGATCAGGAAAATCAGGGTCAGGCCGATCAGCAGGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTgg                                                                                                                                      <  3:97578/149‑1 (MQ=255)        cGGCTGCAAGGTCACCACCACGATCAGGAAAATCAGGGTCAGGCCGATCAGCAGGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTgg                                                                                                                                      <  8:17974/149‑1 (MQ=255)              cAAGGTCACCACCACGATCAGGAAAATCAGGGTCAGGCCGATCAGCAGGATGTCGAGGGCGATTTCGTTTGTGGTCTTCTGCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGAt                                                                                                                                  <  4:170362/147‑1 (MQ=255)                    caccaccacGATCAGGAAAATCAGGGTCAGGCCGATCAGCAGGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGAt                                                                                                                            >  5:167843/1‑147 (MQ=255)                       caccacGATCAGGAAAATCAGGGTCAGGCCGATCAGCAGGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAagca                                                                                                                       <  7:224100/149‑1 (MQ=255)                       caccacGATCAGGAAAATCAGGGTCAGGCCGATCAGCAGGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAag                                                                                                                         >  6:120977/1‑147 (MQ=255)                               gcAGGAAAATCAGGGTCAGGCGGATCAGCAGGATGGCGAGGGCGATTTCGTTTGGGGTGTTCTGCGGCTTGGCACCTTCGGCCAGGGCGCTCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGAGAAGCGGCCGGTCg                                                                                                               >  6:310617/2‑149 (MQ=255)                                  ggAAAATCAGGGTCAGGCCGATCAGCAGGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCg                                                                                                                               >  5:95356/1‑130 (MQ=255)                                  ggAAAATCAGGGTCAGGCCGATCAGCAGGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCg                                                                                                                               <  6:95356/130‑1 (MQ=255)                                        tCAGGGTCAGGCCGATCAGCAGGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGc                                                                                                      <  6:167843/149‑1 (MQ=255)                                           gggTCAGGCCGATCAGCAGGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCcgc                                                                                                   >  6:98813/1‑149 (MQ=255)                                            ggTCAGGCCGATCAGCAGGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCcgcg                                                                                                  >  4:160129/1‑149 (MQ=255)                                                 ggCCGATCAGCAGGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTg                                                                                             >  6:149029/1‑149 (MQ=255)                                                         agcagGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGGCCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCa                                                                                      <  5:310617/148‑1 (MQ=255)                                                         agcagGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGGCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCa                                                                                      <  3:148733/148‑1 (MQ=255)                                                                  tCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCACCGCCGAGCg                                                                            <  5:120977/149‑1 (MQ=255)                                                                         cGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCACCGCCGAGCGGTCGCCa                                                                     >  1:317873/1‑149 (MQ=255)                                                                                          ttctGCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCACCGCCGAGCGGTCGCCACCTGATTCGCGTATTAc                                                    >  5:101422/1‑149 (MQ=255)                                                                                          ttctGCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCACCGCCGAGCGGTCGCCACCTGATTCGCGTATTAc                                                    >  1:65433/1‑149 (MQ=255)                                                                                            ctGCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTTATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCACCGCCGAGCGGTCGCCACCTGATTCGCGTATTAc                                                    <  5:98813/147‑1 (MQ=255)                                                                                              gCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCAccg                                                                                   >  2:221465/1‑114 (MQ=255)                                                                                              gCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCAccg                                                                                   <  1:221465/114‑1 (MQ=255)                                                                                              gCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCACCGCCGAGCGGTCGCCACCTGATTCGCGTATTACCGGt                                                >  3:151352/1‑149 (MQ=255)                                                                                               ccGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCACCGCCGAGCGGTCGCCACCTGATTCGCGTATTACCg                                                  <  3:160129/146‑1 (MQ=255)                                                                                                       cACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCACCGCCGAGCGGTCGCCACCTGATTCGCGTATTACCGGTGCGGATTCg                                       >  6:82808/1‑149 (MQ=255)                                                                                                             cGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCACCGCCGAGCGGTCGCCAc                                                                    >  3:81037/1‑114 (MQ=255)                                                                                                              gACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGggtcgaaggtgccaagcggcagaagaccccaaacgaaatcgccctcgacatcctgctgatcggcctgaccctgattttcc                                                               <  1:21395‑M2/118‑81 (MQ=255)                                                                                                              gACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGggtcgaaggtgccaagcggcagaagaccccaaacgaaatcgccctcgacatcctgctgatcggcctgaccctgattttcc                                                               >  2:21395‑M2/1‑38 (MQ=255)                                                                                                               aCCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGggtcgaaggtgccaagcggcagaagaccccaaacgaaatcgccctcgacatcctgctgatcggcctgaccctgat                                                                    >  7:71785‑M2/1‑37 (MQ=255)                                                                                                               aCCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGggtcgaaggtgccaagcggcagaagaccccaaacgaaatcgccctcgacatcctgctgatcggcctgaccctgat                                                                    <  8:71785‑M2/112‑76 (MQ=255)                                                                                                                 cAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGcc                                                                                                                    <  6:66149/62‑1 (MQ=255)                                                                                                                 cAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGcc                                                                                                                    >  5:66149/1‑62 (MQ=255)                                                                                                                   gggCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCACCGCCGAGCGGTCGCCACCTGATTCGCGTATTACCGGTGCGGATTCGCCGGTAATggcg                           <  6:101422/149‑1 (MQ=255)                                                                                                                         tCATGCGGTCCAGGGGCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCACCGCCGAGCGGTCGCCACCTGATTCGCGTATTACCGGTGCGGATTCGCCGGTAATGGCGGCCTCg                     <  5:149029/149‑1 (MQ=255)                                                                                                                               ggTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCACCGCCGAGCGGTCGCCACCTGATTCGCGTATTACCGGTGCGGATTCGCCGGTAATGGCGGCCTCGTTGACg               <  4:151352/149‑1 (MQ=255)                                                                                                                                gTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCACCGCCGAGCGGTCGCCACCTGATTCGCGTATTACCGGTGCGGATTCGCCGGTAATg                              >  2:206346/1‑133 (MQ=255)                                                                                                                                gTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCACCGCCGAGCGGTCGCCACCTGATTCGCGTATTACCGGTGCGGATTCGCCGGTAATg                              <  1:206346/133‑1 (MQ=255)                                                                                                                                gTCCAGGGTCGACTCGCCCGGGTTGCTGGTGAAGCGGATTAGCAGCCAGTAGGAGACCAGCCGCGTATTGCCGGTAACCGCCGAGCGGTCGCCACCGGATTGGCGTATTACCGGTGCGGCTTCGGCGGTAATGGCGGCCTCGTTGACgg              >  1:37884/1‑149 (MQ=255)                                                                                                                                             tCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCACCGCCGAGCGGTCGCCACCTGATTCGCGTATTACCGGTGCGGATTCGCCGGTAATGGCGGCCTCGTTGACGGCCGCAATGCCtt  >  6:248649/1‑148 (MQ=255)                                                                                                                                               gCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCACCGCCGAGCGGTCGCCACCTGATTCGCGTATTACCGGTGCGGATTCGCCGGTAATGGCGGCCTCGTTGACGGCCGCAATGCCtt  <  5:248649/146‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                              GGGCGAACGGCTGCAAGGTCACCACCACGATCAGGAAAATCAGGGTCAGGCCGATCAGCAGGATGTCGAGGGCGATTTCGTTTGGGGTCTTCTGCCGCTTGGCACCTTCGACCAGGGCGATCATGCGGTCCAGGGTCGACTCGCCCGGGTTGCTGGTGATGCGGATAAGCAGCCAGTCGGAGACCAGCCGCGTATTGCCGGTCACCGCCGAGCGGTCGCCACCTGATTCGCGTATTACCGGTGCGGATTCGCCGGTAATGGCGGCCTCGTTGACGGCCGCAATGCCTT  >  NC_002947/4702718‑4703005

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.