| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5147701 = | NA (NA) | 3 (0.060) | 3/244 | NT | 15.0% | coding (806/1302 nt) | mscMB | miniconductance mechanosensitive channel protein |
| ? | NC_002947 | 5147725 = | 18 (0.360) | coding (830/1302 nt) | mscMB | miniconductance mechanosensitive channel protein | |||||
GGTCCGCCACCGGCCCCAGCGCCTCGTTCCAGTTTTGCAGTTCCTGGCGCTTGCCCGCCAGGTAGTCACTCAGTAGCTGCACCTGGCTCAGGCGCTGTTCTTCTTCGCGGGTGAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCtgcgctt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5147847‑5147701‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTGAGCCAGGTGCAGCTACTGAGTGACTACCTGGCGGGCAAGCGCCAGGAACTGCAAAACTGGAACGAGGCGCTGGGGCCGGTGGC > NC_002947/5147725‑5147842 GGTCCGCCACCGGCCCCAGCGCCTCGTTCCAGTTTTGCAGTTCCTGGCGCTTGCCCGCCAGGTAGTCACTCAGTAGCTGCACCTGGCTCAGGCGCTGTTCTTCTTCGCGGGTGAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCTG < 8:21604/149‑1 GTCCGCCACCGGCCCCAGCGCCTCGTTCCAGTTTTGCAGTTCCTGGCGCTTGCCCGCCAGGTAGTCACTCAGTAGCTGCACCTGGCTCAGGCGCTGTTCTTCTTCGCGGGTGAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCTGC > 5:184053/1‑149 GTCCGCCACCGGCCCCAGCGCCTCGTTCCAGTTTTGCAGTTCCTGGCGCTTGCCCGCCAGGTAGTCACTCAGTAGCTGCACCTGGCTCAGGCGCTGTTCTTCTTCGCGGGTGAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCTGC > 5:291546/1‑149 GTCCGCCACCGGCCCCAGCGCCTCGTTCCAGTTTTGCAGTTCCTGGCGCTTGCCCGCCAGGTAGTCACTCAGTAGCTGCACCTGGCTCAGGCGCTGTTCTTCTTCGCGGGTGAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCTGC > 6:60856/1‑149 CCGCCACCGGCCCCAGCGCCTCGTTCCAGTTTTGCAGTTCCTGGCGCTTGCCCGCCAGGTAGTCACTCAGTAGCTGCACCTGGCTCAGGCGCTGTTCTTCTTCGCGGGTGAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCTGCGC < 3:177996/149‑1 CGCCACCGGCCCCAGCGCCTCGTTCCAGTTTTGCAGTTCCTGGCGCTTGCCCGCCAGGTAGTCACTCAGTAGCTGCACCTGGCTCAGGCGCTGTTCTTCTTCGCGGGTGAGGAAGCGCACGCCGGCGGCGTTGATGAACAGGCTGCGC < 2:187375/148‑1 CCACCGGCCCCAGCGCCTCGTTCCAGTTTTGCAGTTCCTGGCGCTTGCCCGCCAGGTAGTCACTCAGTAGCTGCACCTGGCTCAGGCGCTGTTCTTCTTCGCGGGTGAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCTGCGCTT > 4:32878/1‑148 CCACCGGCCCCAGCGCCTCGTTCCAGTTTTGCAGTTCCTGGCGCTTGCCCGCCAGGTAGTCACTCAGTAGCTGCACCTGGCTCAGGCGCTGTTCTTCTTCGCGGGTGAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCTGCGCTT > 6:84674/1‑148 CTGGCTCAGGCGCTGTTCTTCTTCGCGGGTGAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCTGCGCT > 5:252052/1‑71 CTGGCTCAGGCGCTGTTCTTCTTCGCGGGTGAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCTGCGCT < 6:252052/71‑1 GAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTGAGCCAGGTGCAGCTACTGAGT > 5:203793/1‑91 GAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTGAGCCAGGTGCAGCTACTGAGT < 6:203793/91‑1 AAGCGCACGCCGGCGGCGTCGATGAACAGGCTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTGAGCCAGGTGCAGCTACTGAGTGACTACCTGGCGGGCAAGCGCCAGGAACTGCAAAACTGGAACGAGGCGCTGGGGCCGGTGGC > 4:88159/1‑149 GGTCCGCCACCGGCCCCAGCGCCTCGTTCCAGTTTTGCAGTTCCTGGCGCTTGCCCGCCAGGTAGTCACTCAGTAGCTGCACCTGGCTCAGGCGCTGTTCTTCTTCGCGGGTGAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCtgcgctt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5147847‑5147701‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTGAGCCAGGTGCAGCTACTGAGTGACTACCTGGCGGGCAAGCGCCAGGAACTGCAAAACTGGAACGAGGCGCTGGGGCCGGTGGC > NC_002947/5147725‑5147842 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |