New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5147701 =	NA (NA)	3 (0.060)	3/244	NT	15.0%	coding (806/1302 nt)	mscMB	miniconductance mechanosensitive channel protein
	?	NC_002947	5147725 =	18 (0.360)					coding (830/1302 nt)	mscMB	miniconductance mechanosensitive channel protein

GCGACGTGGTGGACATCACCTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTGAGC  >  NC_002947/5147554‑5147762                                                                                                                                                    |                                                              gCGACGTGGTGGACATCACCTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGc                                                              <  1:139247/149‑1 (MQ=255)  cGACGTGGTGGACATCACCTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCTTCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGcc                                                             <  4:299282/149‑1 (MQ=255)   gACGTGGTGGACATCACCTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCt                                                            >  7:52335/1‑149 (MQ=255)         gtggACATCACCTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCAt                                                      <  1:222294/149‑1 (MQ=255)         gtggACATCACCTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCAt                                                      <  2:21804/149‑1 (MQ=255)               aTCACCTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGtt                                                         >  6:22465/1‑140 (MQ=255)               aTCACCTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGtt                                                         <  5:22465/140‑1 (MQ=255)                  aCCTTGCACGCGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGAcgccgc                                             <  6:208032/149‑1 (MQ=255)                  aCCTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGAcgccgc                                             >  5:84674/1‑149 (MQ=255)                    cTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGccgccg                                           >  1:151216/1‑149 (MQ=255)                         acacGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTg                                      <  4:292686/149‑1 (MQ=255)                               tGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCGGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGTCGCCGGCGTGCGCTTc                                <  4:190207/149‑1 (MQ=255)                               tGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTc                                <  7:33326/149‑1 (MQ=40)                                   aGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCa                            <  8:187664/149‑1 (MQ=38)                                      aCAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCTGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGa                                                   <  7:87221/123‑1 (MQ=25)                                      aCAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGa                                                   >  8:87221/1‑123 (MQ=35)                                      aCAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCAccc                         >  1:109243/1‑149 (MQ=35)                                        aGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCcgc                       >  8:37208/1‑149 (MQ=34)                                        aGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCcgc                       >  1:237934/1‑149 (MQ=34)                                        aGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCAGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCcgc                       >  5:173628/1‑149 (MQ=21)                                            cTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCAcgcgcg                      >  6:333257/1‑146 (MQ=21)                                             ttCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCgaag                   >  2:207174/1‑148 (MQ=34)                                                   aaGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACa            <  1:315810/149‑1 (MQ=34)                                                     gACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACa            <  4:152219/147‑1 (MQ=34)                                                     gACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACa            >  3:152219/1‑147 (MQ=34)                                                        cATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTg                                      >  4:3600/1‑118 (MQ=34)                                                        cATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTg                                      <  3:3600/118‑1 (MQ=34)                                                        cATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAgcgc        >  8:89058/1‑148 (MQ=33)                                                        cATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGcc       <  7:89058/149‑1 (MQ=33)                                                        cATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGcc       >  4:179232/1‑149 (MQ=33)                                                           cGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCt      >  5:212424/1‑147 (MQ=32)                                                            gtgtCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTGa    <  1:207174/148‑1 (MQ=32)                                                             tgtCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTGAGc  >  6:130565/1‑149 (MQ=31)                                                                                                                                                    |                                                              GCGACGTGGTGGACATCACCTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTGAGC  >  NC_002947/5147554‑5147762

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.