| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5263136 = | 50 (0.990) | 5 (0.100) | 4/244 | NT | 9.8% | coding (1309/1488 nt) | PP_4638 | methylenetetrahydrofolate reductase |
| ? | NC_002947 | 5263184 = | 45 (0.940) | coding (1357/1488 nt) | PP_4638 | methylenetetrahydrofolate reductase | |||||
ATGGCTGCGGGCTGAGCCGCTGCGGTGCCTGCCCCGCGAACCACTGCGGCCATGAGCTGCGGTGGCGGGTTTCGACCTCGATGCACGGGATCAGGCGCTCGGTCAGCACAGCGGTTTGCCGCACGGCTTTGGCGGTGCGGTACTTGACGCTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5263289‑5263136‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgtgCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCGCAGCCATTGCCT > NC_002947/5263184‑5263294 ATGGCTGCGGGCTGAGCCGCTGCGGTGCCTGCCCCGCGAACCACTGCGGCCATGAGCTGCGGTGGCGGGTTTCGACCTCGATGCACGGGATCAGGCGCTCGGTCAGCACAGCGGTTTGCCGCACGGCTTTGGCGGTGCGGTACTTGACG < 8:111450/149‑1 CAGCACAGCGGTTTGCCGCACGGCTTTGGCGGTGCGGTACTTGACGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCC > 5:201567/1‑149 AGCACAGCGGTTTGCCGCACGGCTTTGGCGGTGCGGTACTTGACGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCG > 5:327538/1‑149 CACAGCGGTTTGCCGCACGGCTTTGGCGGTGCGGTACTTGACGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCG > 6:18936/1‑147 CACAGCGGTTTGCCGCACGGCTTTGGCGGTGCGGTACTTGACGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCG > 7:292657/1‑147 GCCGCACGGCTTTGGCGGTGCGGTACTTGACGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCGCAGCCATTGCCT < 6:201567/148‑1 ATGGCTGCGGGCTGAGCCGCTGCGGTGCCTGCCCCGCGAACCACTGCGGCCATGAGCTGCGGTGGCGGGTTTCGACCTCGATGCACGGGATCAGGCGCTCGGTCAGCACAGCGGTTTGCCGCACGGCTTTGGCGGTGCGGTACTTGACGCTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5263289‑5263136‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgtgCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCGCAGCCATTGCCT > NC_002947/5263184‑5263294 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |