New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5263136 = | 50 (0.990) | 5 (0.100) | 4/244 | NT | 9.8% | coding (1309/1488 nt) | PP_4638 | methylenetetrahydrofolate reductase |
? | NC_002947 | 5263184 = | 45 (0.940) | coding (1357/1488 nt) | PP_4638 | methylenetetrahydrofolate reductase |
TTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCGCAGCCATTGCCTCGAAGCCAGCCCGAATCGTAGCCTCGGGCAGTTCATCG > NC_002947/5263037‑5263332 | ttGTATATCTGCCCGGAAACCTGCCCTAAAGGCCTAGGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGc > 1:210241/1‑149 (MQ=255) cgggctgagccgctgcggtgcctgccccgcgaaccactgcggccatgagctgcggtggcgggtttcgacctcgatgcacgggatcaggcgctcggtcagCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCt > 5:327538‑M1/100‑149 (MQ=255) gggctgagccgctgcggtgcctgccccgcgaaccactgcggccatgagctgcggtggcgggtttcgacctcgatgcacgggatcaggcgctcggtcagCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTg > 5:201567‑M1/99‑149 (MQ=255) tataTCTGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGAc < 4:150812/149‑1 (MQ=255) atatCTGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGAcc > 2:149163/1‑149 (MQ=255) atCTGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGAcc > 6:127197/1‑147 (MQ=255) tGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAgcg > 7:88383/1‑149 (MQ=255) tGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAgcg > 5:288629/1‑149 (MQ=255) gCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAgcgc > 6:313575/1‑149 (MQ=255) cccGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGcc < 6:288629/149‑1 (MQ=255) cGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGAc > 5:80236/1‑139 (MQ=255) cGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGAc < 6:80236/139‑1 (MQ=255) gAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGAt < 5:127197/149‑1 (MQ=255) cTGCCCTAAATGCCT‑GGCCAATGGCCCTTGCGGCTGTACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTTCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCTGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGt < 5:160103/149‑1 (MQ=255) tAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATc > 3:127078/1‑148 (MQ=255) tAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATc > 7:195969/1‑148 (MQ=255) aaaGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAgcgc > 3:247030/1‑132 (MQ=255) aaaGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAgcgc < 4:247030/132‑1 (MQ=255) gCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTc > 2:161056/1‑149 (MQ=255) gCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAAc < 3:5426/149‑1 (MQ=255) gCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAAc < 1:3112/149‑1 (MQ=255) cAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAAccc < 8:88383/149‑1 (MQ=255) ccTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCg < 2:210241/149‑1 (MQ=255) ccTTGCGGCGGAACCGCCCGGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCg < 6:187579/149‑1 (MQ=255) ttGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCAc < 6:72687/145‑1 (MQ=255) ttGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCAc > 5:72687/1‑145 (MQ=255) ttGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCg > 7:76619/1‑147 (MQ=255) cGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCAt > 5:107577/1‑143 (MQ=255) cGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCAt < 6:107577/143‑1 (MQ=255) aaCCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGt < 8:195969/148‑1 (MQ=255) cGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGggc > 5:49120/1‑149 (MQ=255) ggCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCAcc > 8:37472/1‑149 (MQ=255) gCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCCGGGCAGGCACCg > 4:115603/1‑149 (MQ=255) gCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCCCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATCGCCGCACTCGTTCGCGCGGCAGGCACCg > 6:85242/1‑149 (MQ=255) cgcgAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTTACCGAGCGCCTGATCCCGTGCATCGATGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCg > 8:89417/1‑149 (MQ=255) cgAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGc > 4:203986/1‑149 (MQ=255) gTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCa < 1:149163/149‑1 (MQ=255) tGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAg < 5:313575/149‑1 (MQ=255) cagcacagcggtttgccgcacggctttggcggtgcggtacttgacgctgtgCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGccc > 5:201567‑M2/52‑149 (MQ=255) agcacagcggtttgccgcacggctttggcggtgcggtacttgacgctgtgCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCg > 5:327538‑M2/51‑149 (MQ=255) cacagcggtttgccgcacggctttggcggtgcggtacttgacgctgtgCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCg > 6:18936‑M2/49‑147 (MQ=255) cacagcggtttgccgcacggctttggcggtgcggtacttgacgctgtgCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCg > 7:292657‑M2/49‑147 (MQ=255) CGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCGCAGCCAt < 8:111450‑M1/149‑1 (MQ=255) tCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGggc > 7:214426/1‑117 (MQ=255) tCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGggc < 8:214426/117‑1 (MQ=255) aaGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCGCAGCCATTGcc > 3:286511/1‑149 (MQ=255) gccgcacggctttggcggtgcggtacttgacgctgtgCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCGCAGCCATTGCCt < 6:201567‑M2/111‑1 (MQ=255) accgcCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCGCAGCCATTGCCTCGAagc > 7:110644/1‑147 (MQ=255) gcCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCGCAGCCATTGCCTCGAagccagcc < 7:111450/149‑1 (MQ=255) ccAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCGCAGCCATTGCCTCGAAGCCAGccc > 4:92386/1‑149 (MQ=255) ccAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCGCAGCCATTGCCTCGAAGCCAGccc > 2:264341/1‑149 (MQ=255) cAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCGCAGCCATTGCCTCGAAGCCAGccc > 1:80000/1‑148 (MQ=255) aaaGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCGCAGCCATTGCCTCGAAGCCAGCCCg > 6:234066/1‑148 (MQ=255) gCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCGCAGCCATTGCCTCGAAGCCAGCCCGAATc < 7:37472/149‑1 (MQ=255) ccGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCGCAGCCATTGCCTCGAAGCCAGCCCGAATCg < 6:49120/149‑1 (MQ=255) gTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCGCAGCCATTGCCTCGAAGCCAGCCCGAATCGTa < 2:80000/149‑1 (MQ=255) gTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCGCAGCCATTGCCTCGAAGCCAGCCCGAATCGTa < 3:92386/149‑1 (MQ=255) cTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCGCAGCCATTGCCTCGAAGCCAGCCCGAATCGTAGCCTCGGGCAGTTCATCg < 4:286511/149‑1 (MQ=255) | TTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAGCCCGCAGCCATTGCCTCGAAGCCAGCCCGAATCGTAGCCTCGGGCAGTTCATCG > NC_002947/5263037‑5263332 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |