New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5263136 =	50 (0.990)	5 (0.100)	4/244	NT	9.8%	coding (1309/1488 nt)	PP_4638	methylenetetrahydrofolate reductase
	?	NC_002947	5263184 =	45 (0.940)					coding (1357/1488 nt)	PP_4638	methylenetetrahydrofolate reductase

GTGGGTTGCGACACCTGCGGCCGTTGCCGCCTGGAAGACACCTTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAG  >  NC_002947/5262995‑5263278                                                                                                                                               |                                                                                                                                               gtggGTTGCGACACCTGCGGCCGTTGCCGCCTGGAAGACACCTTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGt                                                                                                                                         >  3:150812/1‑149 (MQ=255)    ggTTGCGACACCTGCGGCCGTTGCCGCCTGGAAGACACCTTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCaa                                                                                                                                      <  1:93592/149‑1 (MQ=255)                tGCGGCCGTTGCCGCCTGGAAGACACCTTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTaccgcaccgc                                                                                                                          >  6:124320/1‑149 (MQ=255)                 gCGGCCGTTGCCGCCTGGAAGACACCTTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTaccgcaccgc                                                                                                                          >  4:263771/1‑148 (MQ=255)                    gCCGTTGCCGCCTGGAAGACACCTTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCAGAGCGTCAAGTACCGCACCGCCaaa                                                                                                                      <  7:35299/149‑1 (MQ=255)                      cGTTGCCGCCTGGAAGACACCTTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGc                                                                                                                    >  2:3112/1‑149 (MQ=255)                           ccgccTGGAAGACACCTTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGc                                                                                                               <  3:263771/149‑1 (MQ=255)                               cTGGAAGACACCTTGTATATCTGCCCGGAAACCTGCCCTAATGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCa                                                                                                           <  7:77890/149‑1 (MQ=255)                                tGGAAGACACCTTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGt                                                                                                                 <  4:216938/142‑1 (MQ=255)                                tGGAAGACACCTTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGt                                                                                                                 >  3:216938/1‑142 (MQ=255)                                aggcaatggctgcgggctgagccgctgcggtgcctgccccgcgaaccactgcggccatgagctgcggtggcgggtttcgacctcgatgcacgggatcaggcgctcggtcagCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGc                                                                                                            <  6:201567‑M1/37‑1 (MQ=255)                                   aaGACACCTTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAAcc                                                                                                       >  4:5426/1‑149 (MQ=255)                                    aGACACCTTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGTACCGCCCTGAACCGCTGCGAGTTAGGCGACCGCGAGTGAATCCACAGCGTCAAGTACCTCACAGAAAAAGCCGTGCGGCAAAcc                                                                                                       >  6:160103/1‑148 (MQ=255)                                           ttGTATATCTGCCCGGAAACCTGCCCTAAAGGCCTAGGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGc                                                                                                >  1:210241/1‑149 (MQ=255)                                            cgggctgagccgctgcggtgcctgccccgcgaaccactgcggccatgagctgcggtggcgggtttcgacctcgatgcacgggatcaggcgctcggtcagCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCtgtg                                                                                                 >  6:18936‑M1/100‑147 (MQ=255)                                            cgggctgagccgctgcggtgcctgccccgcgaaccactgcggccatgagctgcggtggcgggtttcgacctcgatgcacgggatcaggcgctcggtcagCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCtgtg                                                                                                 >  7:292657‑M1/100‑147 (MQ=255)                                            cgggctgagccgctgcggtgcctgccccgcgaaccactgcggccatgagctgcggtggcgggtttcgacctcgatgcacgggatcaggcgctcggtcagCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCt                                                                                               >  5:327538‑M1/100‑149 (MQ=255)                                             gggctgagccgctgcggtgcctgccccgcgaaccactgcggccatgagctgcggtggcgggtttcgacctcgatgcacgggatcaggcgctcggtcagCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTg                                                                                              >  5:201567‑M1/99‑149 (MQ=255)                                              tataTCTGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGAc                                                                                            <  4:150812/149‑1 (MQ=255)                                               atatCTGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGAcc                                                                                           >  2:149163/1‑149 (MQ=255)                                                 atCTGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGAcc                                                                                           >  6:127197/1‑147 (MQ=255)                                                    tGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAgcg                                                                                      >  7:88383/1‑149 (MQ=255)                                                    tGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAgcg                                                                                      >  5:288629/1‑149 (MQ=255)                                                     gCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAgcgc                                                                                     >  6:313575/1‑149 (MQ=255)                                                      cccGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGcc                                                                                    <  6:288629/149‑1 (MQ=255)                                                        cGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGAc                                                                                            <  6:80236/139‑1 (MQ=255)                                                        cGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGAc                                                                                            >  5:80236/1‑139 (MQ=255)                                                          gAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGAt                                                                                <  5:127197/149‑1 (MQ=255)                                                               cTGCCCTAAATGCCT‑GGCCAATGGCCCTTGCGGCTGTACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTTCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCTGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGt                                                                           <  5:160103/149‑1 (MQ=255)                                                                     tAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATc                                                                      >  3:127078/1‑148 (MQ=255)                                                                     tAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATc                                                                      >  7:195969/1‑148 (MQ=255)                                                                      aaaGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAgcgc                                                                                     <  4:247030/132‑1 (MQ=255)                                                                      aaaGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAgcgc                                                                                     >  3:247030/1‑132 (MQ=255)                                                                       aaGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGc                                                                                                            <  3:174611/108‑1 (MQ=255)                                                                       aaGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGc                                                                                                            >  4:174611/1‑108 (MQ=255)                                                                          gCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTc                                                                >  2:161056/1‑149 (MQ=255)                                                                                gCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAAc                                                           <  1:3112/149‑1 (MQ=255)                                                                                gCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAAc                                                           <  3:5426/149‑1 (MQ=255)                                                                                  cAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAAccc                                                         <  8:88383/149‑1 (MQ=255)                                                                                         ccTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCg                                                  <  2:210241/149‑1 (MQ=255)                                                                                         ccTTGCGGCGGAACCGCCCGGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCg                                                  <  6:187579/149‑1 (MQ=255)                                                                                           ttGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCAc                                                    <  6:72687/145‑1 (MQ=255)                                                                                           ttGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCAc                                                    >  5:72687/1‑145 (MQ=255)                                                                                           ttGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCg                                                  >  7:76619/1‑147 (MQ=255)                                                                                                       cGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCAt                                          >  5:107577/1‑143 (MQ=255)                                                                                                       cGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCAt                                          <  6:107577/143‑1 (MQ=255)                                                                                                              aaCCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGt                              <  8:195969/148‑1 (MQ=255)                                                                                                                      cGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGggc                     >  5:49120/1‑149 (MQ=255)                                                                                                                             ggCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCAcc              >  8:37472/1‑149 (MQ=255)                                                                                                                              gCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCCGGGCAGGCACCg             >  4:115603/1‑149 (MQ=255)                                                                                                                              gCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCCCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATCGCCGCACTCGTTCGCGCGGCAGGCACCg             >  6:85242/1‑149 (MQ=255)                                                                                                                                   cgcgAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTTACCGAGCGCCTGATCCCGTGCATCGATGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCg        >  8:89417/1‑149 (MQ=255)                                                                                                                                     cgAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGc      >  4:203986/1‑149 (MQ=255)                                                                                                                                        gTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCa   <  1:149163/149‑1 (MQ=255)                                                                                                                                         tGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAg  <  5:313575/149‑1 (MQ=255)                                                                                                                                               |                                                                                                                                               GTGGGTTGCGACACCTGCGGCCGTTGCCGCCTGGAAGACACCTTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCT‑GGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGTCAAGTACCGCACCGCCAAAGCCGTGCGGCAAACCGCTGTGCTGACCGAGCGCCTGATCCCGTGCATCGAGGTCGAAACCCGCCACCGCAGCTCATGGCCGCAGTGGTTCGCGGGGCAGGCACCGCAGCGGCTCAG  >  NC_002947/5262995‑5263278

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.