| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5629790 = | 45 (0.890) | 5 (0.100) | 3/246 | NT | 10.6% | coding (476/1629 nt) | putP | sodium/L‑proline transporter |
| ? | NC_002947 | 5629844 = | 41 (0.850) | coding (422/1629 nt) | putP | sodium/L‑proline transporter | |||||
GCTGATGGGCCTGCCCGGTGCCATCTACTTCGCGGGCCTGTCCGAGGCCTGGATCGCCATCGGCCTGACAGTGGGTGCCTACCTGAACTGGCTGTTCGTGGCAGGCCGGCTGCGCGTGCAGACCGAACACAATGGTGACGCGCTGACCCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5629942‑5629790‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgccACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCGGTAACCACG > NC_002947/5629844‑5629990 GCTGATGGGCCTGCCCGGTGCCATCTACTTCGCGGGCCTGTCCGAGGCCTGGATCGCCATCGGCCTGACAGTGGGTGCCTACCTGAACTGGCTGTTCGTGGCAGGCCGGCTGCGCGTGCAGACCGAACACAATGGTGACGCGCTGACCC > 7:26525/1‑149GCTGATGGGCCTGCCCGGTGCCATCTACTTCGCGGGCCTGTCCGAGGCCTGGATCGCCATCGGCCTGACAGTGGGTGCCTACCTGAACTGGCTGTTCGTGGCAGGCCGGCTGCGCGTGCAGACCGAACACAATGGTGACGCGCTGACC < 7:222933/148‑1GCTGATGGGCCTGCCCGGTGCCATCTACTTCGCGGGCCTGTCCGAGGCCTGGATCGCCATCGGCCTGACAGTGGGTGCCTACCTGAACTGGCTGTTCGTGGCAGGCCGGCTGCGCGTGCAGACCGAACACAATGGTGACGCGCTGACC > 8:222933/1‑148 TGATGGGCCTGCCCGGTGCCATCTACTTCGCGGGCCTGTCCGAGGCCTGGATCGCCATCGGCCTGACAGTGGGTGCCTACCTGAACTGGCTGTTCGTGGCAGGCCGGCTGCGCGTGCAGACCGAACACAATGGTGACGCGCTGACCCTG > 1:16893/1‑149 ATGGGCCTGCCCGGTGCCATCTACTTCGCGGGCCTGTCCGAGGCCTGGATCGCCATCGGCCTGACAGTGGGTGCCTACCTGAACTGGCTGTTCGTGGCAGGCCGGCTGCGCGTGCAGACCGAACACAATGGTGACGCGCTGACCCTGC < 4:137576/148‑1 CTTCGCGGGCCTGTCCGAGGCCTGGATCGCCATCGGCCTGACAGTGGGTGCCTACCTGAACTGGCTGTTCGTGGCAGGCCGGCTGCGCGTGCAGACCGAACACAATGGTGACGCGCTGACCCTGCC < 5:218352/126‑1 CTTCGCGGGCCTGTCCGAGGCCTGGATCGCCATCGGCCTGACAGTGGGTGCCTACCTGAACTGGCTGTTCGTGGCAGGCCGGCTGCGCGTGCAGACCGAACACAATGGTGACGCGCTGACCCTGCC > 6:218352/1‑126 TTCGTGGCAGGCCGGCTGCGCGTGCAGACCGAACACAATGGTGACGCGCTGACCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGA > 3:198641/1‑135 TTCGTGGCAGGCCGGCTGCGCGTGCAGACCGAACACAATGGTGACGCGCTGACCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGA < 4:198641/135‑1 TTCGTGGCAGGCCGGCTGCGCGTGCAGACCGAACACAATGGTGACGCGCTGACCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGA > 5:288225/1‑135 TTCGTGGCAGGCCGGCTGCGCGTGCAGACCGAACACAATGGTGACGCGCTGACCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGA < 6:288225/135‑1 GTGGCAGGCCGGCTGCGCGTGCAGACCGAACACAATGGTGACGCGCTGACCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCC > 8:211653/1‑148 CTGACCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCG < 7:211653/149‑1 CTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCGGTAACC < 4:121779/149‑1 GCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCGGTAACCAC > 6:196472/1‑149 CCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCGGTAACCACG < 5:196472/149‑1 GCTGATGGGCCTGCCCGGTGCCATCTACTTCGCGGGCCTGTCCGAGGCCTGGATCGCCATCGGCCTGACAGTGGGTGCCTACCTGAACTGGCTGTTCGTGGCAGGCCGGCTGCGCGTGCAGACCGAACACAATGGTGACGCGCTGACCCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5629942‑5629790‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgccACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCGGTAACCACG > NC_002947/5629844‑5629990 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |