New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5629790 = | 45 (0.890) | 5 (0.100) | 3/246 | NT | 10.6% | coding (476/1629 nt) | putP | sodium/L‑proline transporter |
? | NC_002947 | 5629844 = | 41 (0.850) | coding (422/1629 nt) | putP | sodium/L‑proline transporter |
CACAGTAGATGGTGAAGAACACCAGGATGACGATGGCGGAAATGATACGCAGCAGCCCGCTATTGTCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCGGTAACCACG > NC_002947/5629698‑5629990 | ggcctgcccggtgccatctacttcgcgggcctgtccgaggcctggatcgccatcggcctgacagtgggtgcctacctgaactggctgttcgtGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCAc > 8:211653‑M1/93‑148 (MQ=255) gATGTTGAAGAACACCAGGATGACTATGGCTGAAATGATACGCAGCAGACCGCTATTGTGTTCGTAACGTCTGGAGAAGTAGTGCTGCAGGGTCAGAGCGTGACGATTGTGTTCTGTCTGCACGCGCAGGCGTCCTGCCACGAACAGc < 5:227880/148‑1 (MQ=255) ggTGAAGAACCCCAGGATGACGATGGCGGAAATGATACGCAGCAGCCCGCTATTGTCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGt > 2:16893/1‑149 (MQ=255) ggTGAAGAACACCAGGATGACGATGGCGGAAATGATACGCAGCAGCCCGCTATTGTCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGt > 6:287517/1‑149 (MQ=255) tGAAGAACACCAGGATGACGATGGCGGAAATGATACGCAGCAGCCCGCTATTGTCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCTGCCTGCCACGAACAGCCAGTTc < 3:71275/149‑1 (MQ=255) tctacttcgcgggcctgtccgaggcctggatcgccatcggcctgacagtgggtgcctacctgaactggctgttcgtGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGaa > 5:288225‑M1/77‑135 (MQ=255) tctacttcgcgggcctgtccgaggcctggatcgccatcggcctgacagtgggtgcctacctgaactggctgttcgtGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGaa < 4:198641‑M1/59‑1 (MQ=255) tctacttcgcgggcctgtccgaggcctggatcgccatcggcctgacagtgggtgcctacctgaactggctgttcgtGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGaa > 3:198641‑M1/77‑135 (MQ=255) tctacttcgcgggcctgtccgaggcctggatcgccatcggcctgacagtgggtgcctacctgaactggctgttcgtGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGaa < 6:288225‑M1/59‑1 (MQ=255) cAGGATGACGATGGCGGAAATGATACGCAGCAGCCCGCTATTGTCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCa > 7:114224/1‑135 (MQ=255) tGACGATGGCGGAAATGATACGCAGCAGCCCGCTATTGTCTTCGAAACGGCTGGAGAAGTAGTCCGTCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCCCGCGCAGCCGGCCTGCACCGCACAGCACGGTCCGGTAGGCAACCACt > 6:227681/1‑149 (MQ=255) gACGATGGCGGAAATGATACGCAGCAGCCCGCTATTGTCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTg > 8:26525/1‑149 (MQ=255) cGATGGCGGAAATGATACGCAGCAGCCCGCTATTGTCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGt > 2:121680/1‑148 (MQ=255) aTGGCGGAAATGATACGCAGCAGCCCGCTATTGTCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAg < 6:121829/149‑1 (MQ=255) tGGCGGAAATGATACGCAGCAGCCCGCTATTGTCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAgg > 5:168987/1‑149 (MQ=255) ggAAATGATACGCAGCAGCCCGCTATTGTCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGa > 5:39686/1‑149 (MQ=255) ggAAATGATACGCAGCAGCCCGCTATTGTCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGa > 1:47737/1‑149 (MQ=255) aaaTGATACGCAGCAGCCCGCTATTGTCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATg < 6:168987/149‑1 (MQ=255) aCGCAGCAGCCCGCTATTGTCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATc > 5:282780/1‑148 (MQ=255) cagcagCCCGCTATTGTCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCa < 2:254815/125‑1 (MQ=255) cagcagCCCGCTATTGTCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCa > 1:254815/1‑125 (MQ=255) ccGCTATTGTCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGa > 6:52367/1‑149 (MQ=255) gCTATTGTCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCGCGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGa > 5:189300/1‑147 (MQ=255) tATTGTCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAgg > 4:52796/1‑149 (MQ=255) ttGTCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAgg < 5:52367/147‑1 (MQ=255) tCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATgg > 4:227247/1‑124 (MQ=255) tCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATgg < 3:227247/124‑1 (MQ=255) gAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGt < 6:39686/149‑1 (MQ=255) gtagtCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCggg > 2:132176/1‑147 (MQ=255) tagtCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGc > 6:259480/1‑147 (MQ=255) tagtCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGc < 5:259480/147‑1 (MQ=255) ttcgtggcaggccggctgcgcgtgcagaccgaacacaatggtgacgcgctgaccctgccACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGa < 6:288225‑M2/76‑1 (MQ=255) ttcgtggcaggccggctgcgcgtgcagaccgaacacaatggtgacgcgctgaccctgccACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGa > 3:198641‑M2/60‑135 (MQ=255) ttcgtggcaggccggctgcgcgtgcagaccgaacacaatggtgacgcgctgaccctgccACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGa > 5:288225‑M2/60‑135 (MQ=255) ttcgtggcaggccggctgcgcgtgcagaccgaacacaatggtgacgcgctgaccctgccACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGa < 4:198641‑M2/76‑1 (MQ=255) tCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGcc > 4:113042/1‑149 (MQ=255) gtggcaggccggctgcgcgtgcagaccgaacacaatggtgacgcgctgaccctgccACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGcc > 8:211653‑M2/57‑148 (MQ=255) cGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCa > 2:304621/1‑149 (MQ=255) GGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAg < 5:218352‑M1/126‑1 (MQ=255) GGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAg > 6:218352‑M1/1‑126 (MQ=255) GCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCAt < 4:137576‑M1/148‑1 (MQ=255) CAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATca > 1:16893‑M1/1‑149 (MQ=255) GGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATcagc > 7:26525‑M1/1‑149 (MQ=255) GGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATcagc < 7:222933‑M1/148‑1 (MQ=255) GGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATcagc > 8:222933‑M1/1‑148 (MQ=255) cgcgTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGcagccagc > 3:121779/1‑149 (MQ=255) aCCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTc < 2:47737/148‑1 (MQ=255) ttGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTc > 1:323678/1‑149 (MQ=255) gtgtTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCg > 2:76715/1‑148 (MQ=255) ttCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAgg < 6:282780/149‑1 (MQ=255) gcgcAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATg < 6:330680/130‑1 (MQ=255) gcgcAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATg > 5:330680/1‑130 (MQ=255) gcgcAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACa < 2:323678/149‑1 (MQ=255) gcgcAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACAGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCCCCGGCAGa > 1:227610/1‑147 (MQ=255) gcAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCcg < 6:2174/81‑1 (MQ=255) gcAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCcg < 6:6836/81‑1 (MQ=255) gcAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCcg > 5:6836/1‑81 (MQ=255) gcAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCcg > 5:2174/1‑81 (MQ=255) ctgaccctgccACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGcgcg < 7:211653‑M2/138‑1 (MQ=255) ctgccACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCGGTAAcc < 4:121779‑M2/144‑1 (MQ=255) gccACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCGGTAACCAc > 6:196472‑M2/4‑149 (MQ=255) ccACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCGGTAACCACg < 5:196472‑M2/147‑1 (MQ=255) | CACAGTAGATGGTGAAGAACACCAGGATGACGATGGCGGAAATGATACGCAGCAGCCCGCTATTGTCTTCGAAACGGCTGGAGAAGTAGTCCGGCAGGGTCAGCGCGTCACCATTGTGTTCGGTCTGCACGCGCAGCCGGCCTGCCACGAACAGCCAGTTCAGGTAGGCACCCACTGTCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCGGTAACCACG > NC_002947/5629698‑5629990 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |