| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5638366 = | 50 (0.990) | 3 (0.060) | 3/244 | NT | 6.2% | coding (900/1443 nt) | PP_4949 | TldD/PmbA family peptidase |
| ? | NC_002947 | 5638409 = | 44 (0.920) | coding (943/1443 nt) | PP_4949 | TldD/PmbA family peptidase | |||||
GGTTCCAGCCGCAGGCACGGCTGTTGGCCACGCCGTCCAGGCCAGAGCGGAACTGCGACAGCGCGCCACCCAGCGGGCGCAGCAGCAGGCCGTCGCGTATCAGGAACGCTTTGCTGGCCGGGGTGCCGTCGTCGTCATGACTGTAGCTGGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5638520‑5638366‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagcAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGAACCGCGCGCCGATCGACCGCATGGCCAACCTCAACATC > NC_002947/5638409‑5638555 GGTTCCAGCCGCAGGCACGGCTGTTGGCCACGCCGTCCAGGCCAGAGCGGAACTGCGACAGCGCGCCACCCAGCGGGCGCAGCAGCAGGCCGTCGCGTATCAGGAACGCTTTGCTGGCCGGGGTGCCGTCGTCGTCATGACTGTAGCTG < 1:253250/149‑1 CAGCCGCAGGCACGGCTGTTGGCCACGCCGTCCAGGCCAGAGCGGAACTGCGACAGCGCGCCACCCAGCGGGCGCAGCAGCAGGCCGTCGCGTATCAGGAACGCTTTGCTGGCCGGGGTGCCGTCGTCGTCATGACTGTAGCTGGCCAG < 5:1030/149‑1 TTTGCTGGCCGGGGTGCCGTCGTCGTCATGACTGTAGCTGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGG < 5:259391/117‑1 TTTGCTGGCCGGGGTGCCGTCGTCGTCATGACTGTAGCTGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGG > 6:259391/1‑117 CTGGCCGGGGTGCCGTCGTCGTCATGACTGTAGCTGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTG > 2:139572/1‑149 AGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGAACCGCGCGCCGATCGACCGCATGGCCAACCTCAACAT < 6:1030/149‑1 AGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGAA < 3:47411/113‑1 AGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGAA > 4:47411/1‑113 CAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGAACCGCGCGCCGATCGACCGCATGGCCAACCTCAACATC > 6:2901/1‑148 GGTTCCAGCCGCAGGCACGGCTGTTGGCCACGCCGTCCAGGCCAGAGCGGAACTGCGACAGCGCGCCACCCAGCGGGCGCAGCAGCAGGCCGTCGCGTATCAGGAACGCTTTGCTGGCCGGGGTGCCGTCGTCGTCATGACTGTAGCTGGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5638520‑5638366‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagcAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGAACCGCGCGCCGATCGACCGCATGGCCAACCTCAACATC > NC_002947/5638409‑5638555 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |