New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5638366 =	50 (0.990)	3 (0.060)	3/244	NT	6.2%	coding (900/1443 nt)	PP_4949	TldD/PmbA family peptidase
	?	NC_002947	5638409 =	44 (0.920)					coding (943/1443 nt)	PP_4949	TldD/PmbA family peptidase

ACTACGCCGGCACCAGCTTCGTCAAAACCAGCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGAACCGCGCGCCGATCGACCGCATGGCCAACCTCAACATC  >  NC_002947/5638266‑5638555                                                                                                                                                |                                                                                                                                                   aCTACGCCGGCACCAGCTTCGTCAAAACCAGCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGGACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCg                                                                                                                                               <  6:200495/149‑1 (MQ=255)   tACGCCGGCACCAGCTTCGTCAAAACCAGCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGAGGGCACCCCGGCCAGCAAAGCGtt                                                                                                                                             >  5:196142/1‑149 (MQ=255)      gCCGGCACCAGCTTCGTCAAAACCAGCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTc                                                                                                                                            <  1:62360/147‑1 (MQ=255)      gCCGGCACCAGCTTCGTCAAAACCAGCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTc                                                                                                                                            >  2:62360/1‑147 (MQ=255)         ggCACCAGCTTCGTCAAAACCAGCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGAt                                                                                                                                       <  4:254393/149‑1 (MQ=255)              cAGCTTCGTCAAAACCAGCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATAcgcg                                                                                                                                  >  1:97661/1‑149 (MQ=255)                   tCGTCAAAACCAGCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGc                                                                                                                             >  4:266889/1‑149 (MQ=255)                       cAAAACCAGCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCctgc                                                                                                                         >  7:36239/1‑149 (MQ=255)                        aaaaCCAGCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCctgct                                                                                                                        <  2:97661/149‑1 (MQ=255)                         aaaCCAGCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCaaa                                                                                                                                                  <  4:216741/122‑1 (MQ=255)                         aaaCCAGCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCaaa                                                                                                                                                  >  3:216741/1‑122 (MQ=255)                           aCCAGCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGAGGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCctgctgct                                                                                                                     <  6:196142/149‑1 (MQ=255)                            ccAGCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCctgctgctg                                                                                                                    >  8:275266/1‑149 (MQ=255)                              ccagagcggaactgcgacagcgcgccacccagcgggcgcagcagcaggccgtcgcgtatcaggaacgctttGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCaaa                                                                                                                                                  <  5:259391‑M1/46‑1 (MQ=255)                              ccagagcggaactgcgacagcgcgccacccagcgggcgcagcagcaggccgtcgcgtatcaggaacgctttGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCaaa                                                                                                                                                  >  6:259391‑M1/72‑117 (MQ=255)                                cGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGcc                                                                                                                >  8:99879/1‑149 (MQ=255)                                cGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCAGACCATTGGCGAAGAGCTGGCCAGCTACACTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGAAACGCGACGGCCTGCTGCTGCGcc                                                                                                                >  6:260457/1‑149 (MQ=255)                                  aCTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGCTACGCGACGGCCTGCTGCTGCGCCCg                                                                                                              >  5:185195/1‑149 (MQ=255)                                      cGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTgg                                                                                                          >  3:134013/1‑149 (MQ=255)                                      cGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTgg                                                                                                          >  8:113353/1‑149 (MQ=255)                                                   tACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTc                                                                                             >  4:131118/1‑149 (MQ=255)                                                   tACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTc                                                                                             <  3:266889/149‑1 (MQ=255)                                                        cTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACACCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGc                                                                                           >  5:229396/1‑146 (MQ=255)                                                        cTCCAGCCTGCTGAACGTGACCTTCGACCAGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGc                                                                                           <  6:229396/146‑1 (MQ=255)                                                           cAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTc                                                                                      <  7:275266/148‑1 (MQ=255)                                                             gCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATTACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGc                                                                                   >  7:225988/1‑149 (MQ=255)                                                               ctgctgAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGctc                                                                                 <  8:36239/149‑1 (MQ=255)                                                                    gAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGAAAAGCGTGACGGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGACGGTCCGCTCTGGcc                                                                            >  4:54821/1‑149 (MQ=255)                                                                     aaCGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGcc                                                                            <  7:113353/148‑1 (MQ=255)                                                                                 gacccgaccATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTgg                                                                <  4:134013/148‑1 (MQ=255)                                                                                  acccgaccATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGc                                                               >  6:44893/1‑148 (MQ=255)                                                                                    ccgaccATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCaa                                                            >  1:56167/1‑149 (MQ=255)                                                                                     cgaccATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCaa                                                            >  4:115192/1‑148 (MQ=255)                                                                                           ttGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGt                                                     >  5:123222/1‑149 (MQ=255)                                                                                                gAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCgcaggca                                                >  2:222459/1‑143 (MQ=255)                                                                                                  tttgctggccggggtgccgtcgtcgtcatgactgtagctggccagcAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTgg                                                                              <  5:259391‑M2/71‑1 (MQ=255)                                                                                                  tttgctggccggggtgccgtcgtcgtcatgactgtagctggccagcAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTgg                                                                              >  6:259391‑M2/47‑117 (MQ=255)                                                                                                      ctggccggggtgccgtcgtcgtcatgactgtagctggccagcAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTg                                          >  2:139572‑M2/43‑149 (MQ=255)                                                                                                      CTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTg                                          <  5:1030‑M1/149‑1 (MQ=255)                                                                                                           CAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGAAcc                                     <  1:253250‑M1/149‑1 (MQ=255)                                                                                                             gCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGc                                                               <  6:261566/121‑1 (MQ=255)                                                                                                             gCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGc                                                               >  5:261566/1‑121 (MQ=255)                                                                                                                    tCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTgg                                                                                                          <  6:215523/71‑1 (MQ=255)                                                                                                                    tCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTgg                                                                                                          >  5:215523/1‑71 (MQ=255)                                                                                                                      aTGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGAACCGCGCGCCGAt                           <  6:123222/148‑1 (MQ=255)                                                                                                                      aTGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGAACCGCGCGCCGATc                          >  8:218166/1‑149 (MQ=255)                                                                                                                         acgacgacgGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGAACCGCGCGCCGATCGAc                       >  1:167540/1‑149 (MQ=255)                                                                                                                          cgacgacgGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCCGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGAACCGCGCGCCGATCGAcc                      >  5:135198/1‑149 (MQ=255)                                                                                                                            acgacgGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGAACCGCGCGCCGATCGACCGc                    <  5:44893/149‑1 (MQ=255)                                                                                                                             cgacgGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGAACCGCGCGCCGATCGACCGCa                   <  7:218166/149‑1 (MQ=255)                                                                                                                                cgGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCGCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGAACCGCGCGCCGATCGACCGCATgg                <  2:167540/149‑1 (MQ=255)                                                                                                                                cgGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGACGTGCCTGCGGCTGGACCCGCGCGCCGATCGCCCGCATgg                >  8:564/1‑149 (MQ=255)                                                                                                                                 ggCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGAACCGCGCGCCGATCGACCGCATGGc               <  4:133642/149‑1 (MQ=255)                                                                                                                                    aCCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGAACCGCGCGCCGATCGACCGCATGGCCaa            >  7:245970/1‑149 (MQ=255)                                                                                                                                             agcAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGaa                                       >  4:47411‑M2/4‑113 (MQ=255)                                                                                                                                             agcAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGaa                                       <  3:47411‑M2/110‑1 (MQ=255)                                                                                                                                             agcAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGAACCGCGCGCCGATCGACCGCATGGCCAACCTCAACAt   <  6:1030‑M2/146‑1 (MQ=255)                                                                                                                                               cAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGAACCGCGCGCCGATCGACCGCATGGCCAACCTCAACATc  >  6:2901‑M2/2‑148 (MQ=255)                                                                                                                                                |                                                                                                                                                   ACTACGCCGGCACCAGCTTCGTCAAAACCAGCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTGCGGCTGGAACCGCGCGCCGATCGACCGCATGGCCAACCTCAACATC  >  NC_002947/5638266‑5638555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.