New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5638366 =	50 (0.990)	3 (0.060)	3/244	NT	6.2%	coding (900/1443 nt)	PP_4949	TldD/PmbA family peptidase
	?	NC_002947	5638409 =	44 (0.920)					coding (943/1443 nt)	PP_4949	TldD/PmbA family peptidase

TCGGCCACCCGCTGGAGATGGACCGCATTCTCGGCGACGAGCGCAACTACGCCGGCACC‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTG  >  NC_002947/5638221‑5638509                                                                                                                                                    |                                                                                                                                                gatgttgaggttggccatgcggtcgatcggcgcgcggttccagccgcaggcacggctgttggccacgccgtccaggccagagcggaactgcgacagcgcgccacccagcgggcgcagcagcaggccgtcgcgtatcaggaacgctttg                                                                                                                                                 >  6:2901‑M1/148‑148 (MQ=255)  atgttgaggttggccatgcggtcgatcggcgcgcggttccagccgcaggcacggctgttggccacgccgtccaggccagagcggaactgcgacagcgcgccacccagcgggcgcagcagcaggccgtcgcgtatcaggaacgctttGCt                                                                                                                                               <  6:1030‑M1/3‑1 (MQ=255)    gCCACCCGCTGGAGATGGACCGCATTCTCGGCGACGAGCGCAACTACGCCTGCACC‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGcc                                                                                                                                           <  3:116086/149‑1 (MQ=255)     ccACCCGCTGGAGATGGGCCGCATTCTCGGCGACGAGCGCAACTACGCCGGCACCGAGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGc                                                                                                                                            >  1:250218/1‑148 (MQ=255)     ccACCCGCTGGAGATGGACCGCATTCTCGGCGACGAGCGCAACTACGCCGGCACC‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCa                                                                                                                                          <  5:126582/149‑1 (MQ=255)                 gaTGGGCCGCATTCTCGGCGACGAGCGCAACTACGCCGGCACC‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATg                                                                                                                              <  2:250218/149‑1 (MQ=255)                    ggACCGCATTCTCGGCGACGAGCGCAACTACGCCGGCACC‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGACCGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATgac                                                                                                                            >  6:65965/1‑148 (MQ=255)                    ggACCGCATTCTCGGCGACGAGCGCAACTACGCCGGCACC‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATgac                                                                                                                            >  3:133642/1‑148 (MQ=255)                         gCATTCTCGGCGACGAGCGCAACTACGCCGGCACC‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATgacgacgac                                                                                                                      <  5:63170/149‑1 (MQ=255)                          cATTCTCGGCGACGAGCGCAACTACGCCGGCACC‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGGACGTGACCTACGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGacgacgacg                                                                                                                     >  5:200495/1‑149 (MQ=255)                           aTTCTCGGCGACGAGCGCAACTACGCCGGAAGC‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACgg                                                                                                                    <  4:194252/149‑1 (MQ=255)                            ttCTCGGCGACGAGCGCAACTACGCCGGCACC‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATga                                                                                                                             <  1:10120/139‑1 (MQ=255)                            ttCTCGGCGACGAGCGCAACTACGCCGGCACC‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATga                                                                                                                             >  2:10120/1‑139 (MQ=255)                                      ttccagccgcaggcacggctgttggccacgccgtccaggccagagcggaactgcgacagcgcgccacccagcgggcgcagcagcaggccgtcgcgtatcaggaacgctttGCt                                                                                                                                               <  3:47411‑M1/3‑1 (MQ=255)                                      ttccagccgcaggcacggctgttggccacgccgtccaggccagagcggaactgcgacagcgcgccacccagcgggcgcagcagcaggccgtcgcgtatcaggaacgctttGCt                                                                                                                                               >  4:47411‑M1/111‑113 (MQ=255)                                         cagccgcaggcacggctgttggccacgccgtccaggccagagcggaactgcgacagcgcgccacccagcgggcgcagcagcaggccgtcgcgtatcaggaacgctttGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAg                                                                                                        >  2:139572‑M1/108‑149 (MQ=255)                                              aCTACGCCGGCACC‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGGACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCg                                                                                                 <  6:200495/149‑1 (MQ=255)                                                tACGCCGGCACC‑AGCTTCGTCAAAACCAGGCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATgac                                                                                                                            >  1:24145/1‑121 (MQ=255)                                                tACGCCGGCACC‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATgacg                                                                                                                           >  7:30495/1‑121 (MQ=255)                                                tACGCCGGCACC‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATgacg                                                                                                                           <  8:30495/121‑1 (MQ=255)                                                tACGCCGGCACC‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGAGGGCACCCCGGCCAGCAAAGCGtt                                                                                               >  5:196142/1‑149 (MQ=255)                                                   gCCGGCACC‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTc                                                                                              <  1:62360/147‑1 (MQ=255)                                                   gCCGGCACC‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTc                                                                                              >  2:62360/1‑147 (MQ=255)                                                      ggCACC‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGAt                                                                                         <  4:254393/149‑1 (MQ=255)                                                       gCACC‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCa                                                                                                                  <  8:81871/123‑1 (MQ=255)                                                       gCACC‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCa                                                                                                                  >  7:81871/1‑123 (MQ=255)                                                           c‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATAcgcg                                                                                    >  1:97661/1‑149 (MQ=255)                                                                 tCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGc                                                                               >  4:266889/1‑149 (MQ=255)                                                                     cAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCctgc                                                                           >  7:36239/1‑149 (MQ=255)                                                                      aaaaCCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCctgct                                                                          <  2:97661/149‑1 (MQ=255)                                                                       aaaCCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCaaa                                                                                                    >  3:216741/1‑122 (MQ=255)                                                                       aaaCCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCaaa                                                                                                    <  4:216741/122‑1 (MQ=255)                                                                         aCCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGAGGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCctgctgct                                                                       <  6:196142/149‑1 (MQ=255)                                                                          ccA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCctgctgctg                                                                      >  8:275266/1‑149 (MQ=255)                                                                            a‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGacgacgacg                                                                                                                     <  6:88744/100‑1 (MQ=255)                                                                            a‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGacgacgacg                                                                                                                     >  5:88744/1‑100 (MQ=255)                                                                             ccagagcggaactgcgacagcgcgccacccagcgggcgcagcagcaggccgtcgcgtatcaggaacgctttGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCaaa                                                                                                    >  6:259391‑M1/72‑117 (MQ=255)                                                                             ccagagcggaactgcgacagcgcgccacccagcgggcgcagcagcaggccgtcgcgtatcaggaacgctttGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCaaa                                                                                                    <  5:259391‑M1/46‑1 (MQ=255)                                                                               cGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGcc                                                                  >  8:99879/1‑149 (MQ=255)                                                                               cGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCAGACCATTGGCGAAGAGCTGGCCAGCTACACTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGAAACGCGACGGCCTGCTGCTGCGcc                                                                  >  6:260457/1‑149 (MQ=255)                                                                                 aCTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGCTACGCGACGGCCTGCTGCTGCGCCCg                                                                >  5:185195/1‑149 (MQ=255)                                                                                     cGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTgg                                                            >  3:134013/1‑149 (MQ=255)                                                                                     cGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTgg                                                            >  8:113353/1‑149 (MQ=255)                                                                                                  tACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTc                                               <  3:266889/149‑1 (MQ=255)                                                                                                  tACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTc                                               >  4:131118/1‑149 (MQ=255)                                                                                                       cTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACACCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGc                                             >  5:229396/1‑146 (MQ=255)                                                                                                       cTCCAGCCTGCTGAACGTGACCTTCGACCAGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGc                                             <  6:229396/146‑1 (MQ=255)                                                                                                          cAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTc                                        <  7:275266/148‑1 (MQ=255)                                                                                                            gCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATTACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGc                                     >  7:225988/1‑149 (MQ=255)                                                                                                              ctgctgAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGctc                                   <  8:36239/149‑1 (MQ=255)                                                                                                                   gAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGAAAAGCGTGACGGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGACGGTCCGCTCTGGcc                              >  4:54821/1‑149 (MQ=255)                                                                                                                    aaCGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGcc                              <  7:113353/148‑1 (MQ=255)                                                                                                                                gacccgaccATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTgg                  <  4:134013/148‑1 (MQ=255)                                                                                                                                 acccgaccATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGc                 >  6:44893/1‑148 (MQ=255)                                                                                                                                   ccgaccATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCaa              >  1:56167/1‑149 (MQ=255)                                                                                                                                    cgaccATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCaa              >  4:115192/1‑148 (MQ=255)                                                                                                                                          ttGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGt       >  5:123222/1‑149 (MQ=255)                                                                                                                                               gAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCgcaggca  >  2:222459/1‑143 (MQ=255)                                                                                                                                                    |                                                                                                                                                TCGGCCACCCGCTGGAGATGGACCGCATTCTCGGCGACGAGCGCAACTACGCCGGCACC‑AGCTTCGTCAAAACCA‑GCGACTTCGGCCACCTGCAGTACGGCTCCAGCCTGCTGAACGTGACCTTCGACCCGACCATTGGCGAAGAGCTGGCCAGCTACAGTCATGACGACGACGGCACCCCGGCCAGCAAAGCGTTCCTGATACGCGACGGCCTGCTGCTGCGCCCGCTGGGTGGCGCGCTGTCGCAGTTCCGCTCTGGCCTGGACGGCGTGGCCAACAGCCGTGCCTG  >  NC_002947/5638221‑5638509

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.