| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5807429 = | 43 (0.850) | 3 (0.060) | 3/248 | NT | 6.6% | coding (2018/2454 nt) | mrcA | penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase |
| ? | NC_002947 | 5807464 = | 43 (0.890) | coding (2053/2454 nt) | mrcA | penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase | |||||
CGAGGGTTTCCGGTTGGTCGAAGCCGACCCAAACGGTAGTCACGTAATCGGCGTTGTAACCGGAGAACCAGGCGTCCTTGGATTCGTTGGTCGTACCCGTCTTGCCCGCCAGGTCGGTGCGGCCCAAGGCCAGCGCCCGGCGGCCGGTGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5807581‑5807429‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTACGTGACTACCGTTTGGGTCGGCTTCGACCAACCGGAA > NC_002947/5807464‑5807574 CGAGGGTTTCCGGTTGGTCGAAGCCGACCCAAACGGTAGTCACGTAATCGGCGTTGTAACCGGAGAACCAGGCGTCCTTGGATTCGTTGGTCGTACCCGTCTTGCCCGCCAGGTCGGTGCGGCCCAAGGCCAGCGCCCGGCGGCCGGTG < 5:31401/149‑1CGAGGGTTTCCGGTTGGTCGAAGCCGACCCAAACGGTAGTCACGTAATCGGCGTTGTAACCGGAGAACCAGGCGTCCTTGGATTCGTTGGTCGTACCCGTCTTGCCCGCCAGGTCGGTGCGGCCCAAGGCCAGCGCCCGGCGGCCGGTG > 6:31401/1‑149 ACCCGTCTTGCCCGCCCGGTCGGTGCGGCCCAAGGCCAGCGCCCGGCGGCCGGTGCCGCACCGACCTGGCGGGCAAGACGGGTAC < 8:183732/85‑1 GTGCGGCCCAAGGCCAGCGCCCGGCGGCCGGTGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTACGTGACTACCGTTTGGGTCGGCTTCGACCAACCGGAA > 3:208015/1‑148 GTGCGGCCCAAGGCCAGCGCCCGGCGGCCGGTGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTACGTGACTACCGTTTGGGTCGGCTTCGACCAACCGGAA < 4:208015/148‑1 CGAGGGTTTCCGGTTGGTCGAAGCCGACCCAAACGGTAGTCACGTAATCGGCGTTGTAACCGGAGAACCAGGCGTCCTTGGATTCGTTGGTCGTACCCGTCTTGCCCGCCAGGTCGGTGCGGCCCAAGGCCAGCGCCCGGCGGCCGGTGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5807581‑5807429‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTACGTGACTACCGTTTGGGTCGGCTTCGACCAACCGGAA > NC_002947/5807464‑5807574 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |