| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6099117 = | 34 (0.680) | 3 (0.060) | 3/244 | NT | 9.5% | intergenic (‑29/‑60) | PP_5350/zwf | RpiR family transcriptional regulator/glucose 6‑phosphate 1‑dehydrogenase |
| ? | NC_002947 | 6099162 = | 25 (0.520) | intergenic (‑74/‑15) | PP_5350/zwf | RpiR family transcriptional regulator/glucose 6‑phosphate 1‑dehydrogenase | |||||
CCGGAAGCAATTTGTGCAGGGCCAGATCACCGGTGCCGCCGAAGACCAGAATGTCGCAAGGAATAGTCAAACCACCACTCTCCACGTTCGTTTAACTGGGCGGGTTGGCGTCCATGTAGTATAACTACAAGAAAGCTACAACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6099261‑6099117‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacccgCCCAGTTAAACGAACGTGGAGAGTGGTGGTTTGACTATTCCTTGCGACATTCTGGTCTTCGGCGGCACCGGTGATCTGGCCCTGCACAAATTGCTTCCGGCGCTCTACCACCTGTTTCGCGAGGCCCGTCTGAACCCTGCCGTG > NC_002947/6099162‑6099305 CCGGAAGCAATTTGTGCAGGGCCAGATCACCGGTGCCGCCGAAGACCAGAATGTCGCAAGGAATAGTCAAACCACCACTCTCCACGTTCGTTTAACTGGGCGGGTTGGCGTCCATGTAGTATAACTACAAGAAAGCTACAACCC > 5:237705/1‑144CCGGAAGCAATTTGTGCAGGGCCAGATCACCGGTGCCGCCGAAGACCAGAATGTCGCAAGGAATAGTCAAACCACCACTCTCCACGTTCGTTTAACTGGGCGGGTTGGCGTCCATGTAGTATAACTACAAGAAAGCTACAACCC < 6:237705/144‑1 GGGCGGGTTGGCGTCCATGTAGTATAACTACAAGAAAGCTACAACCCGCCCAGTTAAACGAACGTGGAGAGTGGTGGTTTGACTATTCCTTGCGACATTCTGGTCTTCGGCGGCACCGGTGATCTGGCCCTGCACAAATTGCTTCCGGC > 3:234153/1‑149 GGCGGGTTGGCGTCCATGTAGTATAACTACAAGAAAGCTACAACCCGCCCAGTTAAACGAACGTGGAGAGTGGTGGTTTGACTATTCCTTGCGACATTCTGGTCTTCGGCGGCACCGGTGATCTGGCCCTG < 5:5373/131‑1 GGCGGGTTGGCGTCCATGTAGTATAACTACAAGAAAGCTACAACCCGCCCAGTTAAACGAACGTGGAGAGTGGTGGTTTGACTATTCCTTGCGACATTCTGGTCTTCGGCGGCACCGGTGATCTGGCCCTG > 6:5373/1‑131 CAACCCGCCCAGTTAAACGAACGTGGAGAGTGGTGGTTTGACTATTCCTTGCGACATTCTGGTCTTCGGCGGCACCGGTGATCTGGCCCTGCACAAATTGCTTCCGGCGCTCTACCACCTGTTTCGCGAGGCCCGTCTGAACCCTGCCG > 1:5447/1‑149 AACCCGCCCAGTTAAACGAACGTGGAGAGTGGTGGTTTGACTATTCCTTGCGACATTCTGGTCTTCGGCGGCACCGGTG > 3:17073/1‑79 AACCCGCCCAGTTAAACGAACGTGGAGAGTGGTGGTTTGACTATTCCTTGCGACATTCTGGTCTTCGGCGGCACCGGTG < 4:17073/79‑1 ACCCGCCCAGTTAAACGAACGTGGAGAGTGGTGGTTTGACTATTCCTTGCGACATTCTGGTCTTCGGCGGCACCGGTGATCTGGCCCTGCACAAATTGCTTCCGTCGCTCTACCACCTGTTTCGCGAGGCCCGTCTGAACCCTGCCGTG < 4:60009/149‑1 GCCCAGTTAAACGAACGTGGAGAGTGGTGGTTTGACTATTCCTTGCGACATTCTGGTCTTCGGCGGCACCGGTGATCTGGCCCTGCACAAATTGCTTCCGGCGCTCTACCACCTGTTTCGCGAGGCC > 1:197540/1‑127 GCCCAGTTAAACGAACGTGGAGAGTGGTGGTTTGACTATTCCTTGCGACATTCTGGTCTTCGGCGGCACCGGTGATCTGGCCCTGCACAAATTGCTTCCGGCGCTCTACCACCTGTTTCGCGAGGCC < 2:197540/127‑1 CCGGAAGCAATTTGTGCAGGGCCAGATCACCGGTGCCGCCGAAGACCAGAATGTCGCAAGGAATAGTCAAACCACCACTCTCCACGTTCGTTTAACTGGGCGGGTTGGCGTCCATGTAGTATAACTACAAGAAAGCTACAACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6099261‑6099117‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacccgCCCAGTTAAACGAACGTGGAGAGTGGTGGTTTGACTATTCCTTGCGACATTCTGGTCTTCGGCGGCACCGGTGATCTGGCCCTGCACAAATTGCTTCCGGCGCTCTACCACCTGTTTCGCGAGGCCCGTCTGAACCCTGCCGTG > NC_002947/6099162‑6099305 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |