New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	884164 =	31 (0.620)	4 (0.080)	4/248	NT	11.1%	coding (75/2718 nt)	PP_0767	LuxR family transcriptional regulator
	?	NC_002947	884199 =	34 (0.700)					coding (110/2718 nt)	PP_0767	LuxR family transcriptional regulator

AATGCGCAGCGTTAACGGCTAGTCTCGCAAACATCCATACCGCCGTTGTCTTCCAACCAGAACGAGCCGGCCATGACAGATCTGTCCCGTACCCATGGATTCGCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTGGGCGGGCGGCTGCTGCTGGTCAATGCCCCGGCGGGTTTCGGCAAAAGCTCCCTGGCCATCGAGTTTTGCGAAACACTGCCC  >  NC_002947/884018‑884305                                                                                                                                                   |                                                                                                                                              ccgctggctcaggccaagccacaggctacgccagtgctcgggcagtgtttcgcaaaactcgatggccagggagcttttgccgaaacccgccggggcattgaccagcagcagccgcccgcccaacccggcttccagccgctggcacaAc                                                                                                                                              >  6:61756‑M1/147‑148 (MQ=255)             gccaagccacaggctacgccagtgctcgggcagtgtttcgcaaaactcgatggccagggagcttttgccgaaacccgccggggcattgaccagcagcagccgcccgcccaaaccggcttccagccgctggcacaACCGCTGCCAGACgg                                                                                                                                 <  8:179832‑M1/15‑1 (MQ=255)                         tcGCAAACATCCATACCGCCGTTGTCTTCCAACCAGAACGAGCCGGCCATGACAGATCTGTCCTGTACCCATGGATTCGCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCcgcg                                                                                                                     >  1:145009/1‑149 (MQ=255)                                cATCCATACCGCCGTTGTCTTCCACCCAGACCGAGCCGGCCATGACAGATCTGTCCCGTACCCCTGGATTCGCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTGCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCgg                                                                                                              <  5:328313/149‑1 (MQ=255)                                         cgccgTTGTCTTCCAACCAGAACGAGCCGGCCATGACAGATCTGTCCCGTACCCATGGATTCGCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAg                                                                                                     >  5:158634/1‑149 (MQ=255)                                          gtcgTTGTCTTCCATCCATAACGAGCCGGCCATGACAGATCTGTCCCGTACCCATGGATTCGCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGcc                                                                                                                   <  6:263849/132‑1 (MQ=255)                                          gccgTTGTCTTCCAACCAGAACGAGCCGGCCATGACAGATCTGTCCCGTACCCATGGAATCGCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGCCCATGTGCCGCGcc                                                                                                                   >  5:263849/1‑134 (MQ=255)                                           cagtgtttcgcaaaactcgatggccagggagcttttgccgaaacccgccggggcattgaccagcagcagccgcccgcccaaaccggcttccagccgctggcacaACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCg                                                                                                   >  7:179832‑M1/105‑149 (MQ=255)                                            cgTTGTCTTCCAACCAGAACGAGCCGGCCATGACAGATCTGTCCCGTACCCATGGATTCGCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCgg                                                                                                              >  5:46075/1‑137 (MQ=255)                                            cgTTGTCTTCCAACCAGAACGAGCCGGCCATGACAGATCTGTCCCGTACCCATGGATTCGCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCgg                                                                                                              <  6:46075/137‑1 (MQ=255)                                            cgTTGTCTTCCAACCAGAACGAGCCGGCCATGACAGATCTGTCCCGTACCCATGGATTCGCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCgg                                                                                                  <  4:212917/149‑1 (MQ=255)                                             gTTGTCTTCCAACCAGAACGAGCCGGCCATGACAGATCTGTCCCGTAGCCTTGGATTCGCAAGTCAGGCCGTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTTCCAGCGGc                                                                                                 <  6:18736/149‑1 (MQ=255)                                                     caaaactcgatggccagggagcttttgccgaaacccgccggggcattgaccagcagcagccgcccgcccaaaccggcttccagccgctggcacaACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTtgt                                                                                                          >  4:19528‑M1/95‑132 (MQ=255)                                                     caaaactcgatggccagggagcttttgccgaaacccgccggggcattgaccagcagcagccgcccgcccaaaccggcttccagccgctggcacaACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTtgt                                                                                                          <  3:19528‑M1/38‑1 (MQ=255)                                                             aaCGAGCCGGCCATGACAGATCTGTCCCGTACCCATGGATTCGCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTggg                                                                                 >  4:274092/1‑149 (MQ=255)                                                                       ccATGACAGATCTGTCCTGTACCCATGGATTCGCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTGGGCGGGCGgctg                                                                       <  2:145009/149‑1 (MQ=255)                                                                                    gTCCCGTACCCATGGATTCGCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTGGGCGGGCGgctg                                                                       >  6:206122/1‑136 (MQ=255)                                                                                    gTCCCGTACCCATGGATTCGCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTGGGCGGGCGgctg                                                                       <  5:206122/136‑1 (MQ=255)                                                                                     tCCCGTACCCATGGATTCGCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTGGGCGGGCGGCTGCTGCTGGTCAATGc                                                         >  7:286940/1‑149 (MQ=255)                                                                                             ccATGGATTCGCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCGGGAAGCCGGTTTGGGCGGGCGGCTGCTGCTGGTCAATGCCCcggcgg                                                 <  5:272294/149‑1 (MQ=255)                                                                                              cATGGATTCGCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTGGGCGGGCGGCTGCTGCTGGTCAATGCCCCGGCggg                                                >  5:101390/1‑149 (MQ=255)                                                                                                  gATTCGCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTGGGCGGGCGGCTGCTGCTGGTCAATGCCCCGGCGGGTTTc                                            <  7:216803/149‑1 (MQ=255)                                                                                                     tCGCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTGGGCGGGCGGCTGTTGCTGGTCAATGCCCCGGCGGGTTTCgg                                          >  1:59746/1‑148 (MQ=255)                                                                                                     tCGCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTGGGCGGGCGGCTGCTGCTGGTCAATGCCCCGGCGGGTTTCgg                                          >  4:87880/1‑148 (MQ=255)                                                                                                       gCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGTTTTGGGCGGGCGGCTGCTGCTGGTCAATGCCCCGGCGGGTTTCGGCa                                        <  3:274092/148‑1 (MQ=255)                                                                                                       gCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTGGGCGGGCGGCTGCTGCTGGTCAAt                                                           >  4:243285/1‑129 (MQ=255)                                                                                                       gCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTGGGCGGGCGGCTGCTGCTGGTCAAt                                                           <  3:243285/129‑1 (MQ=255)                                                                                                       gCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTGGGCGGGCGGCTGCTGCTGGTCAATGCCCCGGCGGGTTTCGGCa                                        >  2:111272/1‑148 (MQ=255)                                                                                                         aaGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTGGGCGGGCGGCTGCTGCTGGTCAATGCCCCGGCGGGTTTCGGCaaaa                                     <  6:158634/149‑1 (MQ=255)                                                                                                              aGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCAAGCGGCTGGAAGCCGGTTTGGGCGCGCGGCTGCTGCTGGTCAATGCCCCGGCGGGTTTCGCCAAAAGCTcc                                >  6:202141/1‑149 (MQ=255)                                                                                                                 cccTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTGGGCGGGCGGCTGCTGCTGGTCAATGCCCCGGCGGGTTTCGGCAAAAGCTCCCTg                             <  8:286940/149‑1 (MQ=255)                                                                                                                                    gCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTGGGCGGGCGGCTGCTGCTGGTCAATGCCCCGGCGGGTTTCGGCAAAAGCTCCCTGGCCATCGAGTTTTGCGaaa          >  3:204556/1‑149 (MQ=255)                                                                                                                                        ttcttcCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTGGGCGGGCGGCTGCTGCTGGTCAATGCCCCGGCGGGTTTCGGCAAAAGCTCCCTGGCCATCGAGTTTTGCGAAACACt      >  7:110984/1‑149 (MQ=255)                                                                                                                                           ttcCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTGGGCGGGCGGCTGCTGCTGGTCAATGCCCCGGCGGGTTTCGGCAAAAGCTCCCTGGCCATCGAGTTTTGCGAAACACTGcc   >  7:240222/1‑149 (MQ=255)                                                                                                                                             ccGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTGGGCGGGCGGCTGCTGCTGGTCAATGCCCCGGCGGGTTTCGGCAAAAGCTCCCTGGCCATCGAGTTTTGCGAAACACTGccc  <  4:204556/148‑1 (MQ=255)                                                                                                                                             ccGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTGGGCGGGCGGCTGCTGCTGGTCAATGCCCCGGCGGGTTTCGGCAAAAGCTCCCTGGCCATCGAGTTTTGCGAAACACTGc    <  8:110984/146‑1 (MQ=255)                                                                                                                                              cGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTGGGCGGGCGGCTGCTGCTGGTCAATGCCCCGGCGGGTTTCGGCAAAAGCTCCCTGGCCATCGAGTTTTGCGAAACACTGccc  >  4:20110/1‑147 (MQ=255)                                                                                                                                                   |                                                                                                                                              AATGCGCAGCGTTAACGGCTAGTCTCGCAAACATCCATACCGCCGTTGTCTTCCAACCAGAACGAGCCGGCCATGACAGATCTGTCCCGTACCCATGGATTCGCAAGTCAGGCCCTTGGCCTGCGGGACGGGCGTTTCTTCCGGCCACCGCTGCCAGACGGCCATGTGCCGCGCCTGCGGTTGTGCCAGCGGCTGGAAGCCGGTTTGGGCGGGCGGCTGCTGCTGGTCAATGCCCCGGCGGGTTTCGGCAAAAGCTCCCTGGCCATCGAGTTTTGCGAAACACTGCCC  >  NC_002947/884018‑884305

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.