New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1136258 =	66 (1.310)	3 (0.060)	3/244	NT	5.2%	coding (717/1509 nt)	PP_0997	sigma‑54 dependent transcriptional regulator/sensory box protein
	?	NC_002947	1136328 =	48 (1.010)					coding (647/1509 nt)	PP_0997	sigma‑54 dependent transcriptional regulator/sensory box protein

CCCTGGTTGGCCAGTTCCATCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATC  >  NC_002947/1136112‑1136404                                                                                                                                                    |                                                                                                                                                   cccTGGTTGGCCAGTTCCATCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGgct                                                                                                                                                  <  8:269064/149‑1 (MQ=255)  ccTGGTTGGCCAGTTCCATCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGgctg                                                                                                                                                 <  5:248853/149‑1 (MQ=255)  ccTGGTTGGCCAGTTCCATCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGgctg                                                                                                                                                 >  2:38102/1‑149 (MQ=255)   cTGGTTGGCCAGTTCCATCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGgctgc                                                                                                                                                <  8:83396/149‑1 (MQ=255)    gctgtacccaccttcgcgtatgggcgaacgcctgtcggccctgcaccacgaccacgccgaaggcttcgatgccttgctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccgctgc                                                                                                                                                <  2:164430‑M1/5‑1 (MQ=255)      gatGGCCAGTTCCATCAGCCCAGGCTAGCCACCGCGTTGCGCGCCGGTAAAGCCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTACAGGGCCAGGAACGGGGCCGCATCGCGGCTGCTGa                                                                                                                                             >  8:180504/3‑149 (MQ=255)       ttGGCCAGTTCCATCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGAc                                                                                                                                            <  8:283141/149‑1 (MQ=255)        tacccaccttcgcgtatgggcgaacgcctgtcggccctgcaccacgaccacgccgaaggcttcgatgccttgctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccGctgctg                                                                                                                                              >  7:101137‑M1/141‑147 (MQ=255)           ccAGTTCCATCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCa                                                                                                                                        >  6:172225/1‑149 (MQ=255)            cAGTTCCATCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCAt                                                                                                                                       <  3:148010/149‑1 (MQ=255)             accttcgcgtatgggcgaacgcctgtcggccctgcaccacgaccacgccgaaggcttcgatgccttgctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccgctgc                                                                                                                                                >  8:12870‑M1/136‑140 (MQ=255)             accttcgcgtatgggcgaacgcctgtcggccctgcaccacgaccacgccgaaggcttcgatgccttgctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccgctgc                                                                                                                                                <  7:12870‑M1/5‑1 (MQ=255)               ttCCATCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATgg                                                                                                                                     >  5:183384/1‑148 (MQ=255)                 ccATCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGc                                                                                                                                    <  5:256940/147‑1 (MQ=255)                 ccATCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGc                                                                                                                                    >  6:256940/1‑147 (MQ=255)                  cATCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAgg                                                                                                                                 >  1:274626/1‑149 (MQ=255)                   aTCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGgc                                                                                                                                >  7:173679/1‑149 (MQ=255)                   aTCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGgc                                                                                                                                >  6:21159/1‑149 (MQ=255)                   aTCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCCACCAGCTCGATTTCGGCCAGGGGCTCGGGCAGCGC‑GGCGCGGTACAGGGCCAGCAACGGGGCCGCATGGCGGCTGCTGCCGGCATGGCAGgc                                                                                                                                >  7:203123/1‑149 (MQ=255)                        cccAGGCTTGCCACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCggg                                                                                                                           >  6:197760/1‑149 (MQ=255)                          cAGGCTTGCCACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGc                                                                                                                          >  6:233265/1‑148 (MQ=255)                          cAGGCTTGCCACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCt                                                                                                                         <  6:183384/149‑1 (MQ=255)                            ggCTTGCCACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTAc                                                                                                                       >  5:95943/1‑149 (MQ=255)                                  ccACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTc                                                                                                                 >  1:15073/1‑149 (MQ=255)                                   cACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCt                                                                                                                >  7:106863/1‑149 (MQ=255)                                    aCCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTa                                                                                                                        >  6:322678/1‑140 (MQ=255)                                    aCCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTa                                                                                                                        <  5:322678/140‑1 (MQ=255)                                    aCCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCtt                                                                                                               >  2:28103/1‑149 (MQ=255)                                       gcgTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGATGGCATGGCAGGCGCGGGCTACCAGTTCTTTAc                                                                                                            <  1:38102/149‑1 (MQ=255)                                               cgcCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCg                                                                                                    <  5:176721/149‑1 (MQ=255)                                                  cGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGtc                                                                                                 >  2:191321/1‑149 (MQ=255)                                                    gTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCCGCTGACGGCATGGCAGGCGCGGGCTA‑CAGTTCTTTACCGGTGCCGGTCTCg                                                                                              >  4:235312/1‑149 (MQ=255)                                                     tAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCg                                                                                              <  5:172225/149‑1 (MQ=255)                                                            cccGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGACATGCa                                                                                       >  8:288992/1‑149 (MQ=255)                                                             ccGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCAc                                                                                      >  1:314940/1‑149 (MQ=255)                                                             ccGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCAc                                                                                      >  6:5231/1‑149 (MQ=255)                                                             ccGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCAc                                                                                      >  4:202954/1‑149 (MQ=255)                                                              cGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCAcc                                                                                     <  8:173679/149‑1 (MQ=255)                                                                ggCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCAc                                                                                      >  1:237464/1‑147 (MQ=255)                                                                    cgTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATg                                                                                         >  7:284653/1‑139 (MQ=255)                                                                    cgTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATg                                                                                         <  8:284653/139‑1 (MQ=255)                                                                    cgTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCagcagc                                                                               <  3:167121/149‑1 (MQ=255)                                                                    cgTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCCGCTGACGGCATGGCAGGCGCGGGCTA‑CAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCg                                                                              <  3:235312/149‑1 (MQ=255)                                                                     gTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCg                                                                              <  5:5231/149‑1 (MQ=255)                                                                     gTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCg                                                                              <  3:202954/149‑1 (MQ=255)                                                                      tAGCCGAACATCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCgg                                                                             <  5:21159/149‑1 (MQ=255)                                                                        atgccttgctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGt                                                                            >  3:159781‑M1/77‑149 (MQ=255)                                                                         tgccttgctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTg                                                                           <  7:246705‑M1/74‑1 (MQ=255)                                                                             aCAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATc                                                                       >  2:197713/1‑148 (MQ=255)                                                                               gctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATc                                                                       >  8:246705‑M1/70‑147 (MQ=255)                                                                                 cTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAgcg                                                                  <  2:274626/149‑1 (MQ=255)                                                                                   cGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAgcg                                                                  >  1:184378/1‑147 (MQ=255)                                                                                    gCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAg                                                               >  4:55753/1‑149 (MQ=255)                                                                                      tttCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACcag                                                                                   <  3:266700/127‑1 (MQ=255)                                                                                      tttCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACcag                                                                                   >  4:266700/1‑127 (MQ=255)                                                                                      tttCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACca                                                                                    >  3:161054/1‑126 (MQ=255)                                                                                      tttCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACca                                                                                    <  4:161054/126‑1 (MQ=255)                                                                                         cGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCAc                                                           <  6:95943/148‑1 (MQ=255)                                                                                           gCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCAcgcg                                                        >  6:156495/1‑149 (MQ=255)                                                                                           gCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCAcgcg                                                        <  1:191321/149‑1 (MQ=255)                                                                                            ccAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAgc                                                                   <  6:269674/137‑1 (MQ=255)                                                                                            ccAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAgc                                                                   >  5:269674/1‑137 (MQ=255)                                                                                                   ctcGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGgcgc                                                >  5:233487/1‑149 (MQ=255)                                                                                                    tcGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGcgcg                                               >  1:12070/1‑149 (MQ=255)                                                                                                      gggCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCggg                                             >  2:274689/1‑149 (MQ=255)                                                                                                      gggCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCgg                                              <  5:156495/148‑1 (MQ=255)                                                                                                            tgc‑ggcgCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCtt                                         >  5:50770/2‑147 (MQ=255)                                                                                                            cgc‑gGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGa                                       <  2:15073/149‑1 (MQ=255)                                                                                                            cgc‑gGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGa                                       <  8:106863/149‑1 (MQ=255)                                                                                                                     aGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTCTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCgg                               <  7:211328/149‑1 (MQ=255)                                                                                                                         cAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATg                            <  2:314940/148‑1 (MQ=255)                                                                                                                          aGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGc                          <  6:152184/149‑1 (MQ=255)                                                                                                                            ggCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCg                        >  8:56734/1‑149 (MQ=255)                                                                                                                             gCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCgg                       <  1:274689/149‑1 (MQ=255)                                                                                                                                  gAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGc                                                                          >  1:80561/1‑93 (MQ=255)                                                                                                                                  gAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGc                                                                          <  2:80561/93‑1 (MQ=255)                                                                                                                                  gAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACt                  >  6:320216/1‑149 (MQ=255)                                                                                                                                                  cggcTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATc  <  6:50770/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                   CCCTGGTTGGCCAGTTCCATCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAAGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGC‑GGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATC  >  NC_002947/1136112‑1136404

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.