New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1136258 =	66 (1.310)	3 (0.060)	3/244	NT	5.2%	coding (717/1509 nt)	PP_0997	sigma‑54 dependent transcriptional regulator/sensory box protein
	?	NC_002947	1136328 =	48 (1.010)					coding (647/1509 nt)	PP_0997	sigma‑54 dependent transcriptional regulator/sensory box protein

CGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATACGCGAAGGTGGGTACAGCGTCAG  >  NC_002947/1136179‑1136476                                                                                                                                                      |                                                                                                                                                     cgTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCCGCTGACGGCATGGCAGGCGCGGGCTA‑CAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCg                                                                                                                                                      <  3:235312/149‑1 (MQ=255)  gTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCg                                                                                                                                                      <  3:202954/149‑1 (MQ=255)  gTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCg                                                                                                                                                      <  5:5231/149‑1 (MQ=255)   tAGCCGAACATCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCgg                                                                                                                                                     <  5:21159/149‑1 (MQ=255)    atgccttgctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGt                                                                                                                                                    >  3:159781‑M1/77‑149 (MQ=255)     tgccttgctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTg                                                                                                                                                   <  7:246705‑M1/74‑1 (MQ=255)          aCAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATc                                                                                                                                               >  2:197713/1‑148 (MQ=255)           gctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATc                                                                                                                                               >  8:246705‑M1/70‑147 (MQ=255)              cTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAgcg                                                                                                                                          <  2:274626/149‑1 (MQ=255)                cGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAgcg                                                                                                                                          >  1:184378/1‑147 (MQ=255)                 gCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAg                                                                                                                                       >  4:55753/1‑149 (MQ=255)                      cGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCAc                                                                                                                                   <  6:95943/148‑1 (MQ=255)                        gCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCAcgcg                                                                                                                                >  6:156495/1‑149 (MQ=255)                        gCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCAcgcg                                                                                                                                <  1:191321/149‑1 (MQ=255)                         ccAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAgc                                                                                                                                           <  6:269674/137‑1 (MQ=255)                         ccAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAgc                                                                                                                                           >  5:269674/1‑137 (MQ=255)                                ctcGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGgcgc                                                                                                                        >  5:233487/1‑149 (MQ=255)                                 tcGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGcgcg                                                                                                                       >  1:12070/1‑149 (MQ=255)                                   gggCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCggg                                                                                                                     >  2:274689/1‑149 (MQ=255)                                   gggCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCgg                                                                                                                      <  5:156495/148‑1 (MQ=255)                                         tgcggcgCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCtt                                                                                                                 >  5:50770/2‑147 (MQ=255)                                         cgcgGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGa                                                                                                               <  2:15073/149‑1 (MQ=255)                                         cgcgGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGa                                                                                                               <  8:106863/149‑1 (MQ=255)                                                 aGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTCTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCgg                                                                                                       <  7:211328/149‑1 (MQ=255)                                                     cAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATg                                                                                                    <  2:314940/148‑1 (MQ=255)                                                      aGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGc                                                                                                  <  6:152184/149‑1 (MQ=255)                                                        ggCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCg                                                                                                >  8:56734/1‑149 (MQ=255)                                                         gCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCgg                                                                                               <  1:274689/149‑1 (MQ=255)                                                              gAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGc                                                                                                                                                  >  1:80561/1‑93 (MQ=255)                                                              gAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGc                                                                                                                                                  <  2:80561/93‑1 (MQ=255)                                                              gAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACt                                                                                          >  6:320216/1‑149 (MQ=255)                                                                        gatgcaccgctgctggtgcatggcgagaccggcaccggtaaagaactggtagcccgcgcctgccatgccgtcagcagcGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGc                                                                                  >  8:246705‑M2/79‑147 (MQ=255)                                                                            caccgctgctggtgcatggcgagaccggcaccggtaaagaactggtagcccgcgcctgccatgccgtcagcagcGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCa                                                                            <  7:246705‑M2/75‑1 (MQ=255)                                                                             accgctgctggtgcatggcgagaccggcaccggtaaagaactggtagcccgcgcctgccatgccgtcagcagcGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCAt                                                                           >  3:159781‑M2/74‑149 (MQ=255)                                                                              cggcTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATc                                                                          <  6:50770/149‑1 (MQ=255)                                                                                    CTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATg                                                                                                    <  6:40794‑M1/117‑1 (MQ=255)                                                                                    CTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATg                                                                                                    >  5:40794‑M1/1‑117 (MQ=255)                                                                                    CTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGGGCCGGTCTGGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGcc                                                                    >  7:180504‑M1/1‑149 (MQ=255)                                                                                      GACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCtt                                                                  <  1:214091‑M1/149‑1 (MQ=255)                                                                                            aTGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGcgt                                                            >  1:164430/1‑149 (MQ=255)                                                                                               gCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGcgtgg                                                          <  5:197760/148‑1 (MQ=255)                                                                                               gCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGcgtgg                                                          <  5:233265/148‑1 (MQ=255)                                                                                                  ggCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGcgtggtcgt                                                      <  7:56734/149‑1 (MQ=255)                                                                                                     gcgGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGcgtggtcgtggt                                                   <  3:55753/149‑1 (MQ=255)                                                                                                         gCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAg                                               <  2:214091/149‑1 (MQ=255)                                                                                                          cTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAgg                                              <  7:288992/149‑1 (MQ=255)                                                                                                          cTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAgg                                              <  5:320216/149‑1 (MQ=255)                                                                                                          cTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAgg                                              <  7:110771/149‑1 (MQ=255)                                                                                                            aCCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTc                                                                 <  1:94955/128‑1 (MQ=255)                                                                                                            aCCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTc                                                                 >  2:94955/1‑128 (MQ=255)                                                                                                            aCCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGc                                            >  1:252651/1‑149 (MQ=255)                                                                                                             ccAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAggg                                             <  5:144400/147‑1 (MQ=255)                                                                                                                      tACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGc                                    <  2:237464/147‑1 (MQ=255)                                                                                                                      tACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGGGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGc                                    <  1:197713/147‑1 (MQ=255)                                                                                                                       aCCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGACGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGtt                                 >  5:314637/1‑149 (MQ=255)                                                                                                                       aCCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGtt                                 >  5:319186/1‑149 (MQ=255)                                                                                                                          ggTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGc                              <  8:1082/149‑1 (MQ=255)                                                                                                                              ccGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCa                           >  8:147647/1‑148 (MQ=255)                                                                                                                               cGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATa                         <  8:203123/149‑1 (MQ=255)                                                                                                                                ggTCTCGCCATGCACCAGCAGCGGTGCAGCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATAc                        <  8:280432/149‑1 (MQ=255)                                                                                                                                  tctcGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATAcgc                      >  2:85476/1‑149 (MQ=255)                                                                                                                                      gCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATACGCGAAg                  >  5:258869/1‑149 (MQ=255)                                                                                                                                         aTGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCTGGCCTTGAGCGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACACGCGTTCGCCCATACGCGAAGGTg               >  7:60783/1‑149 (MQ=255)                                                                                                                                         aTGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATACGCGAAGGTg               <  2:12070/149‑1 (MQ=255)                                                                                                                                          tGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATACGCGAAGGTgg              <  6:319186/149‑1 (MQ=255)                                                                                                                                               cagcagcGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATACGCGAAGGTGGGTa           >  7:101137‑M2/8‑147 (MQ=255)                                                                                                                                                 gcagcGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATACGCGAAGGt                >  8:12870‑M2/6‑140 (MQ=255)                                                                                                                                                 gcagcGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATACGCGAAGGt                <  7:12870‑M2/135‑1 (MQ=255)                                                                                                                                                 gcagcGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATACGCGAAGGTGGGTACAGc       <  2:164430‑M2/144‑1 (MQ=255)                                                                                                                                                      ggTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATACGCGAAGGTGGGTACAGCGTcag  <  6:258869/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     CGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATACGCGAAGGTGGGTACAGCGTCAG  >  NC_002947/1136179‑1136476

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.