New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1941523	58 (1.150)	4 (0.080)	4/244	NT	6.6%	coding (65/864 nt)	betX	choline/betaine/carnitine ABC transporter substrate‑binding protein BetX
	?	NC_002947	= 1941539	59 (1.240)					coding (81/864 nt)	betX	choline/betaine/carnitine ABC transporter substrate‑binding protein BetX

GGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATC  >  NC_002947/1941376‑1941671                                                                                                                                                    |                                                                                                                                                      ggCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCAT                                                                                                                                                       >  3:119615‑M1/1‑148 (MQ=255)        gCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGCCGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTg                                                                                                                                               >  8:227223/1‑149 (MQ=255)         cAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTg                                                                                                                                               <  7:187126/148‑1 (MQ=255)         cAGGGCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGc                                                                                                                                              <  4:206418/149‑1 (MQ=255)          aGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGca                                                                                                                                             <  5:174421/149‑1 (MQ=255)            gTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCGCCGCCCTGGTAATGGCCATagcctgtgcagc                                                                                                                                           >  7:237168‑M1/1‑137 (MQ=255)               gCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAg‑g                                                                                                                                        <  3:284797/148‑1 (MQ=255)               gCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAg‑g                                                                                                                                        <  4:67176/148‑1 (MQ=255)               gCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑Gc                                                                                                                                       >  1:85388/1‑149 (MQ=255)                 aGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTa                                                                                                                                     <  4:142709‑M2/149‑2 (MQ=255)                   cTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAg                                                                                                                                          >  3:211979/1‑143 (MQ=255)                   cTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAg                                                                                                                                          <  4:211979/143‑1 (MQ=255)                      gATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTatgg                                                                                                                                  >  7:45765‑M2/1‑143 (MQ=255)                           ggTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAaag                                                                                                                            >  2:15927/1‑148 (MQ=255)                           ggTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAaag                                                                                                                            >  5:211818/1‑148 (MQ=255)                              cgtcTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAaagaag                                                                                                                         >  4:118824/1‑148 (MQ=255)                               gtcTTGTGTTTCAGGTAGATGATTCAATCTCCAAGACCTGACGTGGGGATGCTTTGATGGCAACTTTTAAGAATATGCGACGTTTCCTGGGCGTTGGCACCGCCCTGGTAATGGCCATGAGCGCTGAACAG‑GCTATGGCCAAAGAAGt                                                                                                                        <  7:140740/148‑1 (MQ=255)                               gtcTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCGCCGCCCTGGTAATGGCCAT‑AGC‑CTGTGCAGCGCTcatggccattaccagg                                                                                                                      >  8:237168‑M2/1‑133 (MQ=255)                                              caGATTATTCAATATAAAAGACATGACGAGTGGATGATTTTATGGAAAATTTTAATAAAATGCGACGTTTCCTGGGCTTTGGAACCGACCTTGTAATGGCAATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTTGTTAAGt                                                                                                         <  4:193887/147‑1 (MQ=255)                                                 atgatgCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGAt                                                                                                     <  3:142709/149‑1 (MQ=255)                                                        aaTCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTggg                                                                                              <  3:118824/149‑1 (MQ=255)                                                        aaTCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTggg                                                                                              <  1:15927/149‑1 (MQ=255)                                                            tcCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGa                                                                                          >  1:157179/1‑149 (MQ=255)                                                            tcCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCAT‑AGC‑CTGTGCAGCGCTcatggccattaccaggg                                                                                                                     <  4:288569‑M2/121‑18 (MQ=255)                                                            tcCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCAT‑AGC‑CTGTGCAGCGCTcatggccattaccaggg                                                                                                                     >  3:288569‑M2/1‑104 (MQ=255)                                                             ccAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGcc                                                                                            <  7:100810/146‑1 (MQ=255)                                                             ccAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGcc                                                                                            >  8:100810/1‑146 (MQ=255)                                                              cAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGa                                                                                          >  7:274811/1‑147 (MQ=255)                                                                    cTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTgg                                                                                               >  1:218328/1‑136 (MQ=255)                                                                    cTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTgg                                                                                               <  2:218328/136‑1 (MQ=255)                                                                              gATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCaa                                                                        >  4:188256/1‑149 (MQ=255)                                                                              gATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCaa                                                                        >  7:105079/1‑149 (MQ=255)                                                                              gATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCaa                                                                        >  4:300998/1‑149 (MQ=255)                                                                               aTGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGAcaaccaac                                                                       >  2:94621/1‑149 (MQ=255)                                                                                 gCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGt                                                                     >  6:51317/1‑149 (MQ=255)                                                                                  cTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGt                                                                     <  7:227223/148‑1 (MQ=255)                                                                                  cTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTg                                                                    <  4:37059/149‑1 (MQ=255)                                                                                      gATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCt                                                                 <  4:119615/148‑1 (MQ=255)                                                                                            aaCTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCg                                                             >  7:106467/1‑146 (MQ=255)                                                                                            aaCTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAg                                                          <  5:287577/149‑1 (MQ=255)                                                                                               tttGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTa                                                        >  2:230157/1‑148 (MQ=255)                                                                                                 tGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTaa                                                       <  1:230157/147‑1 (MQ=255)                                                                                                  gaagaaAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATc                                                     <  5:71141/148‑1 (MQ=255)                                                                                                   aagaaAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTg                                                                                   <  4:286651/117‑1 (MQ=255)                                                                                                   aagaaAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTg                                                                                   >  3:286651/1‑117 (MQ=255)                                                                                                     gaaAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAg                                                  >  2:180748/1‑148 (MQ=255)                                                                                                     gaaAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAg                                                  >  6:185336/1‑148 (MQ=255)                                                                                                     gaaAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGc                                                 <  8:274811/149‑1 (MQ=255)                                                                                                       aaaTGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCaa                                               <  5:51317/149‑1 (MQ=255)                                                                                                          tGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCaaaaa                                            <  3:188256/149‑1 (MQ=255)                                                                                                          tGCGACGTGTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCaaaaa                                            <  8:247871/149‑1 (MQ=255)                                                                                                           gCGACGTATCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCAATGGCCAAAGAAGTAAGCATTGCTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCaaaaa                                            >  1:239968/1‑148 (MQ=255)                                                                                                             gACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAAcac                                         >  4:142246/1‑147 (MQ=255)                                                                                                             gACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTc                                         <  8:105079/149‑1 (MQ=255)                                                                                                             gACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTc                                         >  5:171341/1‑149 (MQ=255)                                                                                                              aCGTTTCCTGGGCGTGGGCACCGCCCTCGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCg                                        >  2:168190/1‑149 (MQ=255)                                                                                                               cGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCgg                                       <  1:94621/149‑1 (MQ=255)                                                                                                                gTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGc                                      >  5:229957/1‑149 (MQ=255)                                                                                                                gTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGc                                      >  5:225872/1‑149 (MQ=255)                                                                                                                    ccTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGac                                                                              >  6:11942/1‑105 (MQ=255)                                                                                                                    ccTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGac                                                                              <  5:11942/105‑1 (MQ=255)                                                                                                                     cTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGCAGTAATCAACCAAAAACTCGGCTATGa                                 >  8:300628/1‑149 (MQ=255)                                                                                                                        ggCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGAc                                <  2:157179/147‑1 (MQ=255)                                                                                                                                   cGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAgg                   <  5:185336/149‑1 (MQ=255)                                                                                                                                     cccTGGTAATGGCCATgagcgctgcacaggctatggccattaccagggcggtgcccacgcccaggaaacgtcgcattttcttcaaagttgccatcaaagcatcccctcgtcaggtcttgga                                              <  4:288569‑M1/121‑106 (MQ=255)                                                                                                                                     cccTGGTAATGGCCATgagcgctgcacaggctatggccattaccagggcggtgcccacgcccaggaaacgtcgcattttcttcaaagttgccatcaaagcatcccctcgtcaggtcttgga                                              >  3:288569‑M1/1‑16 (MQ=255)                                                                                                                                      ccTGGTAATGGCCATgagcgctgcacaggctatggccattaccagggcggcgcccacgcccaggaaacgtcgcattttcttcaaagttgccatcaaagcatcccctcgtcaggtcttggagattgcatcatcttcctgcaacacaagac                 >  8:237168‑M1/1‑15 (MQ=255)                                                                                                                                          gTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTg              <  3:300998/147‑1 (MQ=255)                                                                                                                                                 ccATagcctgtgcagcgctcatggccattaccagggcggtgcccacgcccaggaaacgtcgcattttcttcaaagttgccatcaaagcatcccctcgtcaggtcttggagattgcatcatcttcctgcaacacaagacgacctgatc        >  7:45765‑M1/1‑4 (MQ=255)                                                                                                                                                   aTGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAAt   >  1:122417/1‑149 (MQ=255)                                                                                                                                                    tagcctgtgcagcgctcatggccattaccagggcggtgcccacgcccaggaaacgtcgcattttcttcaaagttgccatcaaagcatcccctcgtcaggtcttggagattgcatcatcttcctgcaacacaagacgacctgatccagct   <  4:142709‑M1/149‑149 (MQ=255)                                                                                                                                                    tGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATc  <  6:229957/149‑1 (MQ=255)                                                                                                                                                    tGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATc  <  6:225872/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                      GGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATC  >  NC_002947/1941376‑1941671

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.