New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1941523	58 (1.150)	4 (0.080)	4/244	NT	6.6%	coding (65/864 nt)	betX	choline/betaine/carnitine ABC transporter substrate‑binding protein BetX
	?	NC_002947	= 1941539	59 (1.240)					coding (81/864 nt)	betX	choline/betaine/carnitine ABC transporter substrate‑binding protein BetX

AGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTGGCAGGGTGTG  >  NC_002947/1941392‑1941686                                                                                                                                                     |                                                                                                                                                    aGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTa                                                                                                                                                    <  4:142709‑M2/149‑2 (MQ=255)      gATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTatgg                                                                                                                                                 >  7:45765‑M2/1‑143 (MQ=255)           ggTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAaag                                                                                                                                           >  5:211818/1‑148 (MQ=255)           ggTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAaag                                                                                                                                           >  2:15927/1‑148 (MQ=255)              cgtcTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAaagaag                                                                                                                                        >  4:118824/1‑148 (MQ=255)               gtcTTGTGTTTCAGGTAGATGATTCAATCTCCAAGACCTGACGTGGGGATGCTTTGATGGCAACTTTTAAGAATATGCGACGTTTCCTGGGCGTTGGCACCGCCCTGGTAATGGCCATGAGCGCTGAACAG‑GCTATGGCCAAAGAAGt                                                                                                                                       <  7:140740/148‑1 (MQ=255)               gtcTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCGCCGCCCTGGTAATGGCCAT‑AGC‑CTGTGCAGCGCTcatggccattaccagg                                                                                                                                     >  8:237168‑M2/1‑133 (MQ=255)                              caGATTATTCAATATAAAAGACATGACGAGTGGATGATTTTATGGAAAATTTTAATAAAATGCGACGTTTCCTGGGCTTTGGAACCGACCTTGTAATGGCAATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTTGTTAAGt                                                                                                                        <  4:193887/147‑1 (MQ=255)                                 atgatgCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGAt                                                                                                                    <  3:142709/149‑1 (MQ=255)                                        aaTCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTggg                                                                                                             <  1:15927/149‑1 (MQ=255)                                        aaTCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTggg                                                                                                             <  3:118824/149‑1 (MQ=255)                                            tcCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGa                                                                                                         >  1:157179/1‑149 (MQ=255)                                            tcCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCAT‑AGC‑CTGTGCAGCGCTcatggccattaccaggg                                                                                                                                    <  4:288569‑M2/121‑18 (MQ=255)                                            tcCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCAT‑AGC‑CTGTGCAGCGCTcatggccattaccaggg                                                                                                                                    >  3:288569‑M2/1‑104 (MQ=255)                                             ccAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGcc                                                                                                           >  8:100810/1‑146 (MQ=255)                                             ccAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGcc                                                                                                           <  7:100810/146‑1 (MQ=255)                                              cAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGa                                                                                                         >  7:274811/1‑147 (MQ=255)                                                    cTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTgg                                                                                                              <  2:218328/136‑1 (MQ=255)                                                    cTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTgg                                                                                                              >  1:218328/1‑136 (MQ=255)                                                              gATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCaa                                                                                       >  7:105079/1‑149 (MQ=255)                                                              gATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCaa                                                                                       >  4:300998/1‑149 (MQ=255)                                                              gATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCaa                                                                                       >  4:188256/1‑149 (MQ=255)                                                               aTGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGAcaaccaac                                                                                      >  2:94621/1‑149 (MQ=255)                                                                 gCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGt                                                                                    >  6:51317/1‑149 (MQ=255)                                                                  cTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGt                                                                                    <  7:227223/148‑1 (MQ=255)                                                                  cTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTg                                                                                   <  4:37059/149‑1 (MQ=255)                                                                      gATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCt                                                                                <  4:119615/148‑1 (MQ=255)                                                                            aaCTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCg                                                                            >  7:106467/1‑146 (MQ=255)                                                                            aaCTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAg                                                                         <  5:287577/149‑1 (MQ=255)                                                                               tttGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTa                                                                       >  2:230157/1‑148 (MQ=255)                                                                                 tGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTaa                                                                      <  1:230157/147‑1 (MQ=255)                                                                                  gaagaaAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATc                                                                    <  5:71141/148‑1 (MQ=255)                                                                                   aagaaAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTg                                                                                                  >  3:286651/1‑117 (MQ=255)                                                                                   aagaaAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTg                                                                                                  <  4:286651/117‑1 (MQ=255)                                                                                     gaaAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAg                                                                 >  6:185336/1‑148 (MQ=255)                                                                                     gaaAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAg                                                                 >  2:180748/1‑148 (MQ=255)                                                                                     gaaAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGc                                                                <  8:274811/149‑1 (MQ=255)                                                                                       aaaTGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCaa                                                              <  5:51317/149‑1 (MQ=255)                                                                                          tGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCaaaaa                                                           <  3:188256/149‑1 (MQ=255)                                                                                          tGCGACGTGTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCaaaaa                                                           <  8:247871/149‑1 (MQ=255)                                                                                           gCGACGTATCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCAATGGCCAAAGAAGTAAGCATTGCTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCaaaaa                                                           >  1:239968/1‑148 (MQ=255)                                                                                             gACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAAcac                                                        >  4:142246/1‑147 (MQ=255)                                                                                             gACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTc                                                        >  5:171341/1‑149 (MQ=255)                                                                                             gACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTc                                                        <  8:105079/149‑1 (MQ=255)                                                                                              aCGTTTCCTGGGCGTGGGCACCGCCCTCGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCg                                                       >  2:168190/1‑149 (MQ=255)                                                                                               cGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCgg                                                      <  1:94621/149‑1 (MQ=255)                                                                                                gTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGc                                                     >  5:225872/1‑149 (MQ=255)                                                                                                gTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGc                                                     >  5:229957/1‑149 (MQ=255)                                                                                                    ccTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGac                                                                                             <  5:11942/105‑1 (MQ=255)                                                                                                    ccTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGac                                                                                             >  6:11942/1‑105 (MQ=255)                                                                                                     cTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGCAGTAATCAACCAAAAACTCGGCTATGa                                                >  8:300628/1‑149 (MQ=255)                                                                                                        ggCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGAc                                               <  2:157179/147‑1 (MQ=255)                                                                                                                   cGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAgg                                  <  5:185336/149‑1 (MQ=255)                                                                                                                          gTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTg                             <  3:300998/147‑1 (MQ=255)                                                                                                                                   aTGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAAt                  >  1:122417/1‑149 (MQ=255)                                                                                                                                    tGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATc                 <  6:225872/149‑1 (MQ=255)                                                                                                                                    tGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATc                 <  6:229957/149‑1 (MQ=255)                                                                                                                                      aGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATc                 >  2:142590/1‑147 (MQ=255)                                                                                                                                      aGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATc                 <  1:142590/147‑1 (MQ=255)                                                                                                                                        cgcTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCAtgt             <  6:171341/149‑1 (MQ=255)                                                                                                                                        cgcTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCAtg              <  8:106467/148‑1 (MQ=255)                                                                                                                                         gcTGCACAG‑GCTatggccattaccagggcggcgcccacgcccaggaaacgtcgcattttcttcaaagttgccatcaaagcatcccctcgtcaggtcttggagattgcatcatcttcctgcaacacaagacgacctgatccagctgcgac            >  7:237168‑M2/1‑12 (MQ=255)                                                                                                                                         gcTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCAtgtg            >  5:169767/1‑149 (MQ=255)                                                                                                                                          cTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTgg           >  6:132221/1‑149 (MQ=255)                                                                                                                                           tGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTgg           >  4:202033/1‑148 (MQ=255)                                                                                                                                           tGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTgg           >  4:198067/1‑148 (MQ=255)                                                                                                                                             cacaG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTGGCAg        >  3:264692/1‑149 (MQ=255)                                                                                                                                                aG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTGGCAGGgt     >  6:104088/1‑149 (MQ=255)                                                                                                                                                    cTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTGGCAGGGtgtg  <  2:122417/149‑1 (MQ=255)                                                                                                                                                    cTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTGGCAGGGtgtg  <  1:180748/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    AGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCTATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTGGCAGGGTGTG  >  NC_002947/1941392‑1941686

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.