| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2069690 = | NA (NA) | 4 (0.080) | 4/244 | NT | NA | coding (64/1422 nt) | PP_1846 | group II intron‑encoding maturase |
| ? | NC_002947 | 2069738 = | NA (NA) | coding (112/1422 nt) | PP_1846 | group II intron‑encoding maturase | |||||
GATGAGCGTGCAGAAGTCAGCCGAAGCCGTAGTAAGTGGCGGTTAACCGCGCCACCAAGGGCCGAACAGGTTATGCCGCCAGTAGGCGTCGCCGTCTCGTTGGTAACCGTAATGCAGAAATTTCCCACAGCGGAAACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCAAAGGTGCCGGCGGC > NC_002947/2069555‑2069754 | gacgAGCGTGCAGAAGTCAGCCGAAGCCGTAGTAAGTGGCGGTTAACCGCGCCACCAAGGGCCGAACAGGTTATGCCGCCAGTAGGCGTCACCGTCTCGTTGGTAACCGTAATGCAGAAATTTCCCACAGCGGAAACTGTCATCCCGaa < 7:212277/146‑1 (MQ=1) cccccaAGGGCCGAACAGGTTATGCCGCCAGTAGGCGTCGCCGGCTCGTTGGTAACCGTAATGCAGAAATTTCCCACAGCGGAAACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCAAAGGTGCCggcggc < 6:242937/146‑1 (MQ=1) | GATGAGCGTGCAGAAGTCAGCCGAAGCCGTAGTAAGTGGCGGTTAACCGCGCCACCAAGGGCCGAACAGGTTATGCCGCCAGTAGGCGTCGCCGTCTCGTTGGTAACCGTAATGCAGAAATTTCCCACAGCGGAAACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCAAAGGTGCCGGCGGC > NC_002947/2069555‑2069754 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |