New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3276813 =	56 (1.110)	5 (0.110)	5/236	NT	9.8%	intergenic (‑118/+165)	PP_2875/ampC	hypothetical protein/beta‑lactamase
	?	NC_002947	3276841 =	41 (0.890)					intergenic (‑146/+137)	PP_2875/ampC	hypothetical protein/beta‑lactamase

AGTTCATCATAAAGCCCCCATTACCCATTCATAGGTGATTTTCACAGTTGGCGCTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCC  >  NC_002947/3276668‑3276960                                                                                                                                                   |                                                                                                                                                    ggcttataacgctcgcgttgattgtcggacaaaacgacagaatgtagtgagcaaaaatattcactacaaaatggttgacgccgttcatcgcgcttgggcatgatgaagccgtctccccgatcgggagcggtggcaagggtgttccaGAc                                                                                                                                                   <  5:13040‑M1/3‑1 (MQ=255)      atcatAAAGCCCCCATTACCCATTCATAGGTGATTTTCACAGTTGGCGCTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCt                                                                                                                                              <  3:179498/148‑1 (MQ=255)      atcatAAAGCCCCCATTACACATTCATAGGTGATTTTCACAGTTGTCGCTATCACTGTGTAGCGCACTACAAAGGCTGCTACAGCAGAATCGCAACATGGGCTTTC‑TCACGATGCCTTTTGGACAGTTTCCCTCTACACGGACGGACTg                                                                                                                                             >  6:173172/1‑149 (MQ=255)      ataacgctcgcgttgattgtcggacaaaacgacagaatgtagtgagcaaaaatattcactacaaaatggttgacgccgttcatcgcgcttgggcatgatgaagccgtctccccgatcgggagcggtggcaagggtgttccaGACGGCCt                                                                                                                                              <  3:55251‑M1/8‑1 (MQ=255)       taacgctcgcgttgattgtcggacaaaacgacagaatgtagtgagcaaaaatattcactacaaaatggttgacgccgttcatcgcgcttgggcatgatgaagccgtctccccgatcgggagcggtggcaagggtgttccaGACGGCCt                                                                                                                                              >  4:55251‑M1/141‑148 (MQ=255)           aaaGCCCCCATTACCCATTCATAGGTGATTTTCACAGTTGGCGCTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTa                                                                                                                                        >  8:120347/1‑149 (MQ=255)             aGCCCCCATTACCCATTCATAGGTGATTTTCACAGTTGGCGCTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGTGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTAcc                                                                                                                                      <  5:173172/149‑1 (MQ=255)             aGCCCCCATTACCCATTCATAGGTGATTTTCACAGTTGGCGCTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTAcc                                                                                                                                      <  6:246144/149‑1 (MQ=255)             aGCCCCCAATACCCATTCATAGGTGCTTTTCACAGTTGGCGCTATCACGGTGTATCGCACTACCAAGGCTGCTACACCAGCATCGCAACAGGGGCTTTCTTCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTAc                                                                                                                                       <  1:75649/149‑1 (MQ=255)                ccccATTACCCATTCATAGGTGATTTTCACAGTTGGCGCTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACcgcg                                                                                                                                   >  6:277389/1‑149 (MQ=255)                  ccATTACCCATTCATAGGTGATTTTCACAGTTGGCGCTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACcgcg                                                                                                                                   >  6:289038/1‑147 (MQ=255)                  ccATTACCCATTCATAGGTGATTTTCACAGTTGGCGCTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGCGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTAAcgcg                                                                                                                                   >  5:318599/1‑147 (MQ=255)                   cATTACCCATTCATAGGTGATTTTCACAGTTGGCGCTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAg                                                                                                                                <  7:147561/149‑1 (MQ=255)                       aCCCATTCATAGGTGATTTTCACAGTTGGCGCTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCg                                                                                                                            >  7:151310/1‑149 (MQ=255)                         ccATTCATAGGTGATTTTCACAGTTGGCGCTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTc                                                                                                                          >  2:181106/1‑149 (MQ=255)                         ccATTCATAGGTGATTTTCACAGTTGGCGCTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTc                                                                                                                          >  3:113110/1‑149 (MQ=255)                         ccATTCATAGGTGATTTTCACAGTTGGCGCTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTc                                                                                                                          <  8:88005/149‑1 (MQ=255)                          cATTCATAGGTGATTTTCACAGTTGGCGCTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGTCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCt                                                                                                                         <  3:74871/149‑1 (MQ=255)                            ttCATAGGTGATTTTCACAGTTGGCGCTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTgg                                                                                                                       <  5:289038/149‑1 (MQ=255)                            ttCATAGGTGATTTTCACAGTTGGCGCTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTgg                                                                                                                       <  4:113110/149‑1 (MQ=255)                                  ggTGATTTTCACAGTTGGCGCTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACAcc                                                                                                                 <  1:114745/149‑1 (MQ=255)                                  ggTGATTTTCACAGTTGGCGCTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACAcc                                                                                                                 >  1:195288/1‑149 (MQ=255)                                  ggTGATTTTCACAGTTGGCGCTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTCCGTTACCGCGCAGGCCGTCTGGAACAcc                                                                                                                 <  1:181106/149‑1 (MQ=255)                                             caGTTGGCGCTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGc                                                                                                      <  2:195288/149‑1 (MQ=255)                                                     gcTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATc                                                                                              <  8:151310/149‑1 (MQ=255)                                                         tCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCgg                                                                                            <  5:277389/147‑1 (MQ=255)                                                           aCGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCggg                                                                                           >  2:147355/1‑146 (MQ=255)                                                               tgtAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGc                                                                                                                                                <  6:73052/89‑1 (MQ=255)                                                               tgtAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGc                                                                                                                                                >  5:73052/1‑89 (MQ=255)                                                                 tAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCgcgc                                                                                                                                  <  4:51991/101‑1 (MQ=255)                                                                         tACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATg                                                                          >  6:234390/1‑149 (MQ=255)                                                                         tACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACAGCGCAGGCCGTCTGGAACACCCTTTCCACCGCTCCCGATCGGGGAGACGGCTTCATCATg                                                                          >  5:17471/1‑149 (MQ=255)                                                                           ccAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTcc                                                                                                   >  3:208371/1‑122 (MQ=255)                                                                           ccAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGcc                                                                        >  8:239918/1‑149 (MQ=255)                                                                           ccAAGGCTGCTACAGCAGCATCGCAACAGGGGCGTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTcc                                                                                                   <  4:208371/122‑1 (MQ=255)                                                                                    ctACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGa                                                               >  6:166189/1‑149 (MQ=255)                                                                                        agcagcATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCAACGGACGGCCTGCGTTACCGCGAAGGCCGTCTGGAACAACCTTGCCACCGCTCCCGATCGGGGAGCCGGCGTCATCATGCCCAAGCGCGATGaa                                                           >  1:85841/1‑149 (MQ=255)                                                                                           agcaTCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCg                                                                                                 >  7:53428/1‑108 (MQ=255)                                                                                           agcaTCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCg                                                                                                 <  8:53428/108‑1 (MQ=255)                                                                                            gcaTCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGc                                                       <  4:138268/149‑1 (MQ=255)                                                                                              aTCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGt                                                     >  5:31171/1‑149 (MQ=255)                                                                                                          gCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGACGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGt                                         <  6:318599/149‑1 (MQ=255)                                                                                                            tttC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGc                                                                                                            <  6:331168/80‑1 (MQ=255)                                                                                                            tttC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGc                                                                                                            >  5:331168/1‑80 (MQ=255)                                                                                                              tc‑tcACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGt                                      <  6:17471/148‑1 (MQ=255)                                                                                                                  tccccgatcgggagcggtggcaagggtgttccaGACGGCCTGCGTTACCGCGCAg                                                                                                                                <  7:298017‑M1/22‑1 (MQ=255)                                                                                                                  tccccgatcgggagcggtggcaagggtgttccaGACGGCCTGCGTTACCGCGCAg                                                                                                                                >  8:298017‑M1/34‑55 (MQ=255)                                                                                                                   aCGCTGCCTTTTGGACAGTTTCCCTCTCCTCGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAata                                 >  8:55322/1‑149 (MQ=255)                                                                                                                         ccTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATAttttt                            <  5:234390/148‑1 (MQ=255)                                                                                                                               ggACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCAc                                                                                                         >  7:250286/1‑65 (MQ=255)                                                                                                                               ggACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCAc                                                                                                         <  8:250286/65‑1 (MQ=255)                                                                                                                               ggACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCAc                      >  4:49838/1‑148 (MQ=255)                                                                                                                                 ggtggcaagggtgttccaGACGGCCTGCGCGGTAACGCAGGCCGTCCGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTa                    <  3:253325‑M1/130‑1 (MQ=255)                                                                                                                                    gTTTCCCTCTCCTCGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACAtt                <  7:55322/149‑1 (MQ=255)                                                                                                                                    gTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACAtt                <  7:120347/149‑1 (MQ=255)                                                                                                                                       tCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCt              <  2:85841/148‑1 (MQ=255)                                                                                                                                       tCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCt              <  3:49838/148‑1 (MQ=255)                                                                                                                                       aagggtgttccaGACGGCCTGCGCGGTAACGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTa                    >  3:239821‑M1/13‑142 (MQ=255)                                                                                                                                       aagggtgttccaGACGGCCTGCGCGGTAACGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTa                    <  4:239821‑M1/130‑1 (MQ=255)                                                                                                                                        cccTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGt            >  7:44373/1‑149 (MQ=255)                                                                                                                                            ctcCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCACCCGATCGGGGAGACGGCTTAATCATGCCCAAGCGCGATGAACGGCGGCAACCAATTTGAAGTGAATATTTTTGCTCACTACATTATGTCGta        >  8:254164/1‑148 (MQ=255)                                                                                                                                             tcCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCAc                      >  2:10804/1‑134 (MQ=255)                                                                                                                                             tcCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCAc                      <  1:10804/134‑1 (MQ=255)                                                                                                                                             tcCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGttt       >  5:4911/1‑149 (MQ=255)                                                                                                                                               cACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGTACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGtt        <  1:147355/146‑1 (MQ=255)                                                                                                                                               cACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGttt       <  6:4911/147‑1 (MQ=255)                                                                                                                                               cACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTg     >  2:156578/1‑149 (MQ=255)                                                                                                                                               cACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTg     >  2:213231/1‑149 (MQ=255)                                                                                                                                                  ggacggCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTcc  <  5:166189/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                    AGTTCATCATAAAGCCCCCATTACCCATTCATAGGTGATTTTCACAGTTGGCGCTATCACGGTGTAGCGCACTACCAAGGCTGCTACAGCAGCATCGCAACAGGGGCTTTC‑TCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCC  >  NC_002947/3276668‑3276960

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.