New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3719175	51 (1.010)	3 (0.060)	3/246	NT	5.4%	coding (226/774 nt)	paaF	enoyl‑CoA hydratase/isomerase
	?	NC_002947	= 3719202	56 (1.170)					coding (199/774 nt)	paaF	enoyl‑CoA hydratase/isomerase

GTACTGGCGATGACGATGTCGGCGCACATTGCCAGTTCGCAACCGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAGGGC  >  NC_002947/3719033‑3719322                                                                                                                                               |                                                                                                                                                    gTACTGGCGATGACGATGTCGGCGCACAATGCCAGTTCGCAACCGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTc                                                                                                                                               >  8:41869/1‑149 (MQ=255)               gATGTCGGCGCACATTGCCAGTTCGCAACCGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCAtct                                                                                                                                 >  5:86525/1‑149 (MQ=255)                   tCGGCGCACATTGCCAGTTCGCAACCGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTcgc                                                                                                                              <  6:86525/148‑1 (MQ=255)                     ggCGCACATTGCCAGTTCGCAACCGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCgg                                                                                                                            <  6:125577/148‑1 (MQ=255)                     ggCGCACATTGCCAGTTCGCAACCGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGa                                                                                                                           >  4:191160/1‑149 (MQ=255)                          acaTTGCCAGTTCGCAACCGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATgtcg                                                                                                                      >  4:108676‑M2/1‑145 (MQ=255)                            aTTGCCAGTTCGCAACCGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATgtcggc                                                                                                                    >  8:163826‑M2/1‑143 (MQ=255)                             gtcccagtTCGCACCCGCCACCCAGGGCAGAGCCGTTGACTGCAGCAATCAGCGGGTTGGAGAATGCGGCGACGCGTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACatccgcgagatggccgatcgcgacctggtcggca                                                                                                                   <  8:292100‑M1/146‑35 (MQ=255)                                  aGTTCGCAACCGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTcgcg                                                                                                                             >  4:138839/1‑134 (MQ=255)                                  aGTTCGCAACCGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTcgcg                                                                                                                             <  3:138839/134‑1 (MQ=255)                                       gCAACCGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGc                                                                                                                                      <  7:52360/120‑1 (MQ=255)                                       gCAACCGCCACCCAGGCCATAGCCGTTGACTGCACCAATCAGCGGATTCGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGCATGCCGACCACGTCGCGATCCGc                                                                                                                                      >  8:52360/1‑120 (MQ=255)                                         aaCCGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAAt                                                                                                       <  3:191160/149‑1 (MQ=255)                                          aCCGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAAta                                                                                                      >  3:28094/1‑148 (MQ=255)                                            cGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGcc                                                                                                    >  8:261151/1‑149 (MQ=255)                                                   cAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGgcgc                                                                                             >  7:35164/1‑149 (MQ=255)                                                    aGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCt                                                                                            >  2:149935/1‑149 (MQ=255)                                                        cATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCg                                                                                        <  1:168109/149‑1 (MQ=255)                                                         aTAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCgg                                                                                       >  1:70613/1‑149 (MQ=255)                                                           aGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAAt                                                                                                       <  2:227487/131‑1 (MQ=255)                                                           aGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCATTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAAt                                                                                                       >  1:227487/1‑131 (MQ=255)                                                               gTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATc                                                                                  >  7:161952/1‑148 (MQ=255)                                                                   aCTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATCCATTGCCAATGCGCTACGCGAGGGTGATTGAGGATGCCGACAAGGTCGCGATCGGACATCTCGCGGATGTCGGCGACTGCGGCGAATGACTTGGCGCTGCCGGTAATAACtgt                                                                             >  2:226052/1‑149 (MQ=255)                                                                     tGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTgg                                                                           >  5:48889/1‑149 (MQ=255)                                                                       cagcaATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGcc                                                                                                    >  7:282918/1‑122 (MQ=255)                                                                       cagcaATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGcc                                                                                                    <  8:282918/122‑1 (MQ=255)                                                                          caATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACgg                                                                      <  8:161952/149‑1 (MQ=255)                                                                                gCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTgc                                                                                                              <  7:104212/103‑1 (MQ=255)                                                                                gCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTgc                                                                                                              >  8:104212/1‑103 (MQ=255)                                                                                gCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACtg                                                                              >  6:247200/1‑135 (MQ=255)                                                                                gCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACtg                                                                              <  5:247200/135‑1 (MQ=255)                                                                                 cGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCt                                                               <  7:41869/149‑1 (MQ=255)                                                                                   gTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACatccgcgagatggccgatcgcgacctggtcggcat                                                                                                                  <  6:315177‑M1/96‑36 (MQ=255)                                                                                   gTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACatccgcgagatggccgatcgcgacctggtcggcat                                                                                                                  >  5:315177‑M1/1‑61 (MQ=255)                                                                                       ggCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCtcgtcg                                                          <  8:35164/148‑1 (MQ=255)                                                                                        gCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGtt                                                        >  1:161582/1‑149 (MQ=255)                                                                                               cggcgATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGc                                                  <  2:70613/148‑1 (MQ=255)                                                                                                ggcgATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAAt                                                                                   >  5:299023/1‑114 (MQ=255)                                                                                                ggcgATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAAt                                                                                   <  6:299023/114‑1 (MQ=255)                                                                                                 gcgATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCgg                                                   <  3:30305/145‑1 (MQ=255)                                                                                                 gcgATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCgg                                                   >  4:30305/1‑145 (MQ=255)                                                                                                 gcgATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGc                                               >  3:24421/1‑149 (MQ=255)                                                                                                       cTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTgca                                          <  7:261151/148‑1 (MQ=255)                                                                                                        tttGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTcc                                                      <  4:147467/135‑1 (MQ=255)                                                                                                        tttGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTcc                                                      >  3:147467/1‑135 (MQ=255)                                                                                                          tGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTgcagc                                        <  3:230508/147‑1 (MQ=255)                                                                                                            ccAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTgcagcgcag                                    >  4:232167/1‑149 (MQ=255)                                                                                                            ccAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTgcagcgcag                                    >  4:54422/1‑149 (MQ=255)                                                                                                             cAATGCGCTACGCGCGGGTCATTGAGGATGGCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACgg                                                                      >  1:29135/1‑114 (MQ=255)                                                                                                             cAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACgg                                                                      <  2:29135/114‑1 (MQ=255)                                                                                                                     tACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGtt                           >  5:167424/1‑149 (MQ=255)                                                                                                                       cgcgcgGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATACCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGtt                           <  4:28094/147‑1 (MQ=255)                                                                                                                          gcgGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGcc                      <  4:24421/149‑1 (MQ=255)                                                                                                                           cgGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCa                     <  1:149935/149‑1 (MQ=255)                                                                                                                             ggTCATTGAGGATTCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCGTGCGGCGATTGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGt                   <  1:226052/149‑1 (MQ=255)                                                                                                                                 aTTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGTTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCt               <  5:158485/149‑1 (MQ=255)                                                                                                                                        aTGCCGACCAGGTCGCGATCGGCCATCTCGCGGATgtcggcatcctcaatgacccgcgcgtagcgcattggcaaagcatcgccgcattcgccaaac                                                             <  6:315177‑M2/96‑62 (MQ=255)                                                                                                                                        aTGCCGACCAGGTCGCGATCGGCCATCTCGCGGATgtcggcatcctcaatgacccgcgcgtagcgcattggcaaagcatcgccgcattcgccaaac                                                             >  5:315177‑M2/1‑35 (MQ=255)                                                                                                                                         tGCCGACCAGGTCGCGATCGGCCATCTCGCGGATgtcggcatcctcaatgacccgcgcgtagcgcattggcaacgcgtcgccgcattctccaacccgctgattgctgcagtcaacggctctgccctgggtggcgggtgcgaactgggac       <  8:292100‑M2/149‑116 (MQ=255)                                                                                                                                          gCCGACatccgcgagatggccgatcgcgacctggtcggcatcctcaatgacccgcgcgtagcgcattggcaaagcatcgccgcattcgccaaaccgctgattgctgcagtcaacggctatgccctgggtggcggttgcgaactggcaat      >  8:163826‑M1/1‑6 (MQ=255)                                                                                                                                            tgACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTCCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAgg    >  3:14273/2‑149 (MQ=255)                                                                                                                                            cGACatccgcgagatggccgatcgcgacctggtcggcatcctcaatgacccgcgcgtagcgcattggcaaagcatcgccgcattcgccaaaccgctgattgctgcagtcaacggctatgccctgggtggcggttgcgaactggcaatgt    >  4:108676‑M1/1‑4 (MQ=255)                                                                                                                                            cGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCtcgtc                                                           >  3:200164/1‑94 (MQ=255)                                                                                                                                            cGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCtcgtc                                                           <  4:200164/94‑1 (MQ=255)                                                                                                                                            cGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAgg    <  3:54422/149‑1 (MQ=255)                                                                                                                                            cGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAgg    >  4:162796/1‑149 (MQ=255)                                                                                                                                            cGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAgg    <  6:167424/149‑1 (MQ=255)                                                                                                                                            cGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAgg    >  5:49386/1‑149 (MQ=255)                                                                                                                                              aCCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAGGGc  <  3:232167/149‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                    GTACTGGCGATGACGATGTCGGCGCACATTGCCAGTTCGCAACCGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAGGGC  >  NC_002947/3719033‑3719322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.