New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3719175	51 (1.010)	3 (0.060)	3/246	NT	5.4%	coding (226/774 nt)	paaF	enoyl‑CoA hydratase/isomerase
	?	NC_002947	= 3719202	56 (1.170)					coding (199/774 nt)	paaF	enoyl‑CoA hydratase/isomerase

ACATTGCCAGTTCGCAACCGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAGGGCATTCAAGGCCTCGGGCCGTTGCAGGGTA  >  NC_002947/3719058‑3719350                                                                                                                                                 |                                                                                                                                                     acaTTGCCAGTTCGCAACCGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATgtcg                                                                                                                                                  >  4:108676‑M2/1‑145 (MQ=255)   aTTGCCAGTTCGCAACCGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATgtcggc                                                                                                                                                >  8:163826‑M2/1‑143 (MQ=255)                aaCCGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAAt                                                                                                                                   <  3:191160/149‑1 (MQ=255)                 aCCGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAAta                                                                                                                                  >  3:28094/1‑148 (MQ=255)                   cGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGcc                                                                                                                                >  8:261151/1‑149 (MQ=255)                          cAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGgcgc                                                                                                                         >  7:35164/1‑149 (MQ=255)                           aGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCt                                                                                                                        >  2:149935/1‑149 (MQ=255)                               cATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCg                                                                                                                    <  1:168109/149‑1 (MQ=255)                                aTAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCgg                                                                                                                   >  1:70613/1‑149 (MQ=255)                                  aGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAAt                                                                                                                                   <  2:227487/131‑1 (MQ=255)                                  aGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCATTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAAt                                                                                                                                   >  1:227487/1‑131 (MQ=255)                                      gTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATc                                                                                                              >  7:161952/1‑148 (MQ=255)                                          aCTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATCCATTGCCAATGCGCTACGCGAGGGTGATTGAGGATGCCGACAAGGTCGCGATCGGACATCTCGCGGATGTCGGCGACTGCGGCGAATGACTTGGCGCTGCCGGTAATAACtgt                                                                                                         >  2:226052/1‑149 (MQ=255)                                            tGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTgg                                                                                                       >  5:48889/1‑149 (MQ=255)                                              cagcaATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGcc                                                                                                                                <  8:282918/122‑1 (MQ=255)                                              cagcaATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGcc                                                                                                                                >  7:282918/1‑122 (MQ=255)                                                 caATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACgg                                                                                                  <  8:161952/149‑1 (MQ=255)                                                       gCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTgc                                                                                                                                          <  7:104212/103‑1 (MQ=255)                                                       gCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTgc                                                                                                                                          >  8:104212/1‑103 (MQ=255)                                                       gCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACtg                                                                                                          <  5:247200/135‑1 (MQ=255)                                                       gCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACtg                                                                                                          >  6:247200/1‑135 (MQ=255)                                                        cGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCt                                                                                           <  7:41869/149‑1 (MQ=255)                                                              ggCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCtcgtcg                                                                                      <  8:35164/148‑1 (MQ=255)                                                               gCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGtt                                                                                    >  1:161582/1‑149 (MQ=255)                                                                      cggcgATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGc                                                                              <  2:70613/148‑1 (MQ=255)                                                                       ggcgATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAAt                                                                                                               <  6:299023/114‑1 (MQ=255)                                                                       ggcgATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAAt                                                                                                               >  5:299023/1‑114 (MQ=255)                                                                        gcgATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCgg                                                                               <  3:30305/145‑1 (MQ=255)                                                                        gcgATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCgg                                                                               >  4:30305/1‑145 (MQ=255)                                                                        gcgATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGc                                                                           >  3:24421/1‑149 (MQ=255)                                                                              cTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTgca                                                                      <  7:261151/148‑1 (MQ=255)                                                                               tttGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTcc                                                                                  <  4:147467/135‑1 (MQ=255)                                                                               tttGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTcc                                                                                  >  3:147467/1‑135 (MQ=255)                                                                                 tGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTgcagc                                                                    <  3:230508/147‑1 (MQ=255)                                                                                   ccAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTgcagcgcag                                                                >  4:232167/1‑149 (MQ=255)                                                                                   ccAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTgcagcgcag                                                                >  4:54422/1‑149 (MQ=255)                                                                                    cAATGCGCTACGCGCGGGTCATTGAGGATGGCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACgg                                                                                                  >  1:29135/1‑114 (MQ=255)                                                                                    cAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACgg                                                                                                  <  2:29135/114‑1 (MQ=255)                                                                                            tACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGtt                                                       >  5:167424/1‑149 (MQ=255)                                                                                              cgcgcgGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATACCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGtt                                                       <  4:28094/147‑1 (MQ=255)                                                                                                 gcgGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGcc                                                  <  4:24421/149‑1 (MQ=255)                                                                                                  cgGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCa                                                 <  1:149935/149‑1 (MQ=255)                                                                                                    ggTCATTGAGGATTCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCGTGCGGCGATTGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGt                                               <  1:226052/149‑1 (MQ=255)                                                                                                        aTTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGTTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCt                                           <  5:158485/149‑1 (MQ=255)                                                                                                               aTGCCGACCAGGTCGCGATCGGCCATCTCGCGGATgtcggcatcctcaatgacccgcgcgtagcgcattggcaaagcatcgccgcattcgccaaac                                                                                         >  5:315177‑M2/1‑35 (MQ=255)                                                                                                               aTGCCGACCAGGTCGCGATCGGCCATCTCGCGGATgtcggcatcctcaatgacccgcgcgtagcgcattggcaaagcatcgccgcattcgccaaac                                                                                         <  6:315177‑M2/96‑62 (MQ=255)                                                                                                                tGCCGACCAGGTCGCGATCGGCCATCTCGCGGATgtcggcatcctcaatgacccgcgcgtagcgcattggcaacgcgtcgccgcattctccaacccgctgattgctgcagtcaacggctctgccctgggtggcgggtgcgaactgggac                                   <  8:292100‑M2/149‑116 (MQ=255)                                                                                                                   tgACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTCCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAgg                                >  3:14273/2‑149 (MQ=255)                                                                                                                   cGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCtcgtc                                                                                       >  3:200164/1‑94 (MQ=255)                                                                                                                   cGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCtcgtc                                                                                       <  4:200164/94‑1 (MQ=255)                                                                                                                   cGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAgg                                <  3:54422/149‑1 (MQ=255)                                                                                                                   cGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAgg                                >  4:162796/1‑149 (MQ=255)                                                                                                                   cGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAgg                                <  6:167424/149‑1 (MQ=255)                                                                                                                   cGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAgg                                >  5:49386/1‑149 (MQ=255)                                                                                                                     aCCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAGGGc                              <  3:232167/149‑1 (MQ=255)                                                                                                                          gTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACAGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAGGGCATTc                          >  8:209883/1‑148 (MQ=255)                                                                                                                               gATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCGCAGGGCATTCAAGGcc                    >  8:30958/1‑149 (MQ=255)                                                                                                                                    gCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAGGGCATTCAAGGCCTCggg               >  5:326914/1‑149 (MQ=255)                                                                                                                                        tctcGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAGGGCATTCAAGGCCTCGGGCCGt           >  1:120255/1‑149 (MQ=255)                                                                                                                                         ctcGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAGGGCATTCAAGGCCTCGGGCCGtt          >  1:64444/1‑149 (MQ=255)                                                                                                                                            gcgGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTgcag                                                                     >  2:265711/1‑87 (MQ=255)                                                                                                                                             cgGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAGGGCATTCAAGGCCTCGGGCCGTTGCAg      >  5:199356/1‑149 (MQ=255)                                                                                                                                              ggATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAGGGCATTCAAGGCCTCGGGCCGTTGCAgg     >  4:269642/1‑149 (MQ=255)                                                                                                                                               gATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAGGGCATTCAAGGCCTCGGGCCGTTGCAggg    <  2:161582/149‑1 (MQ=255)                                                                                                                                                 tGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAGGGCATTCAAGGCCTCGGGCCGTTGCAGGGTa  <  6:48889/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                     ACATTGCCAGTTCGCAACCGCCACCCAGGGCATAGCCGTTGACTGCAGCAATCAGCGGTTTGGCGAATGCGGCGATGCTTTGCCAATGCGCTACGCGCGGGTCATTGAGGATGCCGACCAGGTCGCGATCGGCCATCTCGCGGATGTCGGCGCCTGCGGCGAATGCCTTGGCGCTGCCGGTAATCACTGTGGCACGGACATGCTCGTCGTTCCCGGCAGCCTGCAGCGCAGCGGCCAGTTCTGCCAGTAGCTCGGTGCACAGGGCATTCAAGGCCTCGGGCCGTTGCAGGGTA  >  NC_002947/3719058‑3719350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.