New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3885659 =	53 (1.050)	3 (0.060)	3/250	NT	6.1%	coding (1544/1617 nt)	PP_3429	two component system response regulator/sensor histidine kinase
	?	NC_002947	3885699 =	41 (0.840)					coding (1584/1617 nt)	PP_3429	two component system response regulator/sensor histidine kinase

GCTCATCACCGATGTGGGCTTGCCCGGCATGAACGGCCGACAACTGGCAGAAATTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCTTACACGTCAAGCAGGCGTAGCGCCTCATCGGCAAGATGCGCCAGCGAAAACGGCTTGTTCAA  >  NC_002947/3885513‑3885801                                                                                                                                                    |                                                                                                                                               gCTCATCACCGATGTGGGCTTGCCCGGCATGAACGGCCGACAACTGGCAGAAATTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑GCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATg                                                                                                                                               >  1:161491/1‑148 (MQ=255) agtcgattgaagcgcaattgctcgatcagccgggcacggcattgttgaacaagccgttttcgctggcgcatcttgccgatgaggcgctacgcctgcttgacgtgtaaggcgcttcaaggcttacctagaatgtgtgtcactcgagccTg                                                                                                                                               >  3:272900‑M1/148‑149 (MQ=255)   tcgattgaagcgcaattgctcgatcagccgggcacggcattgttgaacaagccgttttcgctggcgcatcttgccgatgaggcgctacgcctgcttgacgtgtaaggcgcttcaaggcttacctagaatgtgtgtcactcgagccTGCa                                                                                                                                             <  5:161651‑M1/4‑1 (MQ=255)     atcaCCGATGTGGGCTTGCCCGGCATGAACGGCCGACAACTGGCAGAAATTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCAc                                                                                                                                            <  5:50352/147‑1 (MQ=255)     atcaCCGATGTGGGCTTGCCCGGCATGAACGGCCGACAACTGGCAGAAATTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCt                                                                                                                                          >  2:193713/1‑149 (MQ=255)       caCCGATGTGGGCTTGCCCGGCATGAACGGCCGACAACTGGCAGAAATTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGa                                                                                                                                        >  7:19425/1‑149 (MQ=255)        aCCGATGTGGGCTTGCCCGGCATGAACGGCCGACAACTGGCAGAAATTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGAt                                                                                                                                       <  5:37593/149‑1 (MQ=255)         ccGATGTGGGCTTGCCCGGCATGAACGGCCGACAACTGGCAGAAATTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATc                                                                                                                                      <  1:193713/149‑1 (MQ=255)         ccGATGTGGGCTTGCCCGGCATGAACGGCCGACAACTGGCAGAAATTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATc                                                                                                                                      >  7:21158/1‑149 (MQ=255)               tgGGCTTGCCCGGCATGAACGGCCGACAACTGGCAGAAATTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCaa                                                                                                                                 <  7:140457/148‑1 (MQ=255)                 ggCTTGCCCGGCATGAACGGCCGACAACTGGCAGAAATTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGcc                                                                                                                              >  3:301161/1‑149 (MQ=255)                    ttGCCCGGCATGAACGGCCGACAACTGGCAGAAATTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGtt                                                                                                                           >  7:127231/1‑149 (MQ=255)                      gCCCGGCATGAACGGCCGACAACTGGCAGAAATTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGtt                                                                                                                           <  3:292200/147‑1 (MQ=255)                      gCCCGGCATGAACGGCCGACAACTGGCAGAAATTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTc                                                                                                                          <  4:44065/148‑1 (MQ=255)                          ggCATGAACGGCCGACAACTGGCAGAAATTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGtt                                                                                                                     <  3:113502/149‑1 (MQ=255)                                   cacggcattgttgaacaagccgttttcgctggcgcatcttgccgatgaggcgctacgcctgcttgacgtgtaaggcgcttcaaggcttacctagaatgtgtgtcactcgagccTGc                                                                                                                                              >  7:223027‑M1/114‑116 (MQ=255)                                   cacggcattgttgaacaagccgttttcgctggcgcatcttgccgatgaggcgctacgcctgcttgacgtgtaaggcgcttcaaggcttacctagaatgtgtgtcactcgagccTGc                                                                                                                                              <  8:223027‑M1/3‑1 (MQ=255)                                        aCAACTGGCAGAAATTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAgg                                                                                                       >  5:52442/1‑149 (MQ=255)                                              ggCAGAAATTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTc                                                                                                    >  6:156002/1‑146 (MQ=255)                                              ggCAGAAATTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTc                                                                                                    <  5:156002/146‑1 (MQ=255)                                               gCAGAAATTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGa                                                                                                  <  8:127231/147‑1 (MQ=255)                                                aacaagccgttttcgctggcgcatcttgccgatgaggcgctacgcctgcttgacgtgtaaggcgcttcaaggcttacctagaatgtgtgtcactcgagccTGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAg                                                                                                 >  6:161651‑M1/101‑148 (MQ=255)                                                  gAAATTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATc                                                                                                                                      >  2:231277/1‑108 (MQ=255)                                                  gAAATTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATc                                                                                                                                      <  1:231277/108‑1 (MQ=255)                                                   aaaTTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGGTCCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGa                                                                                              >  1:257737/1‑148 (MQ=255)                                                   aaaTTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGt                                                                                                >  6:141255/1‑145 (MQ=255)                                                   aaaTTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGt                                                                                                <  5:141255/145‑1 (MQ=255)                                                         ttttcgctggcgcatcttgccgatgaggcgctacgcctgcttgacgtgtaaggcgcttcaaggcttacctagaatgtgtgtcactcgagccTGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAgg                                                                                                       >  4:32050‑M1/92‑133 (MQ=255)                                                         ttttcgctggcgcatcttgccgatgaggcgctacgcctgcttgacgtgtaaggcgcttcaaggcttacctagaatgtgtgtcactcgagccTGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAgg                                                                                                       <  3:32050‑M1/42‑1 (MQ=255)                                                                     gcCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCt                                                                          >  7:103497/1‑149 (MQ=255)                                                                         aCGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTCCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGaa                                                                      <  2:161491/149‑1 (MQ=255)                                                                                 cGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCTTa                                                              <  8:19425/149‑1 (MQ=255)                                                                                      cTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTc                                                                                                    >  1:106285/1‑106 (MQ=255)                                                                                      cTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTc                                                                                                    <  2:106285/106‑1 (MQ=255)                                                                                      cTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGATCGAGTGACACACATTCTAGTTAAGCCTTGAAGCGCCTTACACGt                                                         <  8:12505/149‑1 (MQ=255)                                                                                         ttCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCTTACACGTCaa                                                      <  2:257737/149‑1 (MQ=255)                                                                                            atcaCCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCTTACACGTCAAGc                                                    <  8:103497/148‑1 (MQ=255)                                                                                              caCCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGcc                                                                 <  1:60049/133‑1 (MQ=255)                                                                                              caCCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGcc                                                                 >  2:60049/1‑133 (MQ=255)                                                                                              caCCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGcc                                                                 >  3:312607/1‑133 (MQ=255)                                                                                              caCCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGcc                                                                 <  4:312607/133‑1 (MQ=255)                                                                                               aCCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGAcacaca                                                                                        <  8:210847/109‑1 (MQ=255)                                                                                               aCCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGAcacaca                                                                                        >  7:210847/1‑109 (MQ=255)                                                                                                   gTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCTTACACGTCAAGCAGGCGTAg                                            <  4:283584/149‑1 (MQ=255)                                                                                                    ttACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCTTACACGTCAAGCAGGCGTAgc                                           <  6:52442/149‑1 (MQ=255)                                                                                                       cgcgGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCTTACACGTCAAGCAGGCGTAgcgc                                         <  2:268899/148‑1 (MQ=255)                                                                                                           gAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCTTACACGTCAAGCAGGCGTAgc                                           >  2:224741/1‑142 (MQ=255)                                                                                                           gAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATCCTAGGTAAGCCTTGAAGCGCCTTACACGTCAAGCAGGCGTAgc                                           <  1:224741/142‑1 (MQ=255)                                                                                                                 g‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCTTACACGTCAAGCAGGCGTAGCGCCTCATCGGCa                               >  5:41817/1‑148 (MQ=255)                                                                                                                    cATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGacacac                                                                                         <  2:190246/88‑1 (MQ=255)                                                                                                                          ccGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCtt                                                               >  5:177094/1‑108 (MQ=255)                                                                                                                          ccGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCtt                                                               <  6:177094/108‑1 (MQ=255)                                                                                                                           cgcgAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCTTACACGTCAAGCAGGCGTAGCGCCTCATCGGCAAGATgcgc                       >  7:30716/1‑147 (MQ=255)                                                                                                                           cgcgAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCTTACACATCAAGCAGGCGTAGCGCCTCATCGGCAAGATGCGCCa                     <  5:127966/149‑1 (MQ=255)                                                                                                                            gcgAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCTTACACGTCAAGCAGGCGTAGCGCCTCATCGGCAAGATGCGCCAg                    <  8:21158/149‑1 (MQ=255)                                                                                                                             cgAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCTTACACGTCAAGCAGGCGTAGCGCCTCATCGGCAAGATGCGCCAGc                   >  7:211292/1‑149 (MQ=255)                                                                                                                                    ttCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCTTACACGTCAAGCAGGCGTAGCGCCTCATCGGCAAGATGCGCCAGCGAAAACg            >  2:230465/1‑149 (MQ=255)                                                                                                                                       cTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCTTACACGTCAAGCAGGCGTAGCGCCTCATCGGCAAGATGCGCCAGCGAAAACggat         >  2:269693/1‑147 (MQ=255)                                                                                                                                            cgcTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCTTACACGTCAAGCAGGCGTAGCGCCTCATCGGCAAGATGCGCCAGCGAAAACGGCTTGTTc    <  1:211781/149‑1 (MQ=255)                                                                                                                                             gcTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCTTACACGTCAAGCAGGCGTAGCGCCTCATCGGCAAGATGCGCCAGCGaaaa              >  7:75658/1‑138 (MQ=255)                                                                                                                                             gcTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCTTACACGTCAAGCAGGCGTAGCGCCTCATCGGCAAGATGCGCCAGCGaaaa              <  8:75658/138‑1 (MQ=255)                                                                                                                                              cTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCTTACACGTCAAGCAGGCGTAGCGCCTCATCGGCAAGATGCGCCAGCGAAAACGGCTTGTTcaa  <  8:211292/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                               GCTCATCACCGATGTGGGCTTGCCCGGCATGAACGGCCGACAACTGGCAGAAATTGCCCGCAGCCTGCGCCCACGATTACCGGTGCTGTTCATCACCGGTTACGCGGAAACGG‑CCATGGCCCGCGAAGGCTTCCTGGGCGCTGACATGCACCTGATCTGCAAGCCGTTCGAGTTGCAGCAGTTGCAGGCTCGAGTGACACACATTCTAGGTAAGCCTTGAAGCGCCTTACACGTCAAGCAGGCGTAGCGCCTCATCGGCAAGATGCGCCAGCGAAAACGGCTTGTTCAA  >  NC_002947/3885513‑3885801

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.