New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4037143	51 (1.010)	3 (0.070)	3/234	NT	5.7%	intergenic (+49/‑46)	PP_3557/PP_3558	methyl‑accepting chemotaxis transducer/amino acid ABC transporter substrate‑binding protein
	?	NC_002947	= 4037174	53 (1.160)					intergenic (+80/‑15)	PP_3557/PP_3558	methyl‑accepting chemotaxis transducer/amino acid ABC transporter substrate‑binding protein

TCCCTGTCTGGCCAGGCCAACGAGTCGGCGCGGGTCAGCCAGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCGGCAGAGCAACCTGCGCCTATCCATTTTG  >  NC_002947/4036996‑4037291                                                                                                                                                    |                                                                                                                                                     tCCCTGTCTGGCCAGGCCAACGAGTCGGCGCGGGTCAGCCAGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCgtcgtc                                                                                                                                                     <  2:315102/149‑1 (MQ=255)    cTGTCTGGCCAGGCCAACGAGTCGGCGCGGGTCAGCCAGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTa                                                                                                                                                   >  4:43900/1‑148 (MQ=255)     tGTCTGGCCAGGCCAACGAGTCGGCGCGGGTCAGCCAGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGATGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTaca                                                                                                                                                 >  1:264008/1‑149 (MQ=255)           gcccggccaACGAGTCGGGGCGTGGCATCCAGTCGCAGAACAGCCTGGCCAACCATCAGCAAGCGCTGATGGACCAGTTCGGCGTATGAAGCGAACGGGTCCACGCCAGTGGCACTGAAACTGACAAAACCTCGTCGTCTACACTTGc                                                                                                                                            <  7:109087/148‑1 (MQ=255)           gccaggccaACGAGTCGGCGCGGGTCAGCCAGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGcc                                                                                                                                           <  2:264008/149‑1 (MQ=255)                gccaACGAGTCGGCGCGGGTCAGCCAGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACt                                                                                                                                      <  3:232508/149‑1 (MQ=255)                 ccaACGAGTCGGCGCGGGTCAGCCAGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTg                                                                                                                                     >  1:176640/1‑149 (MQ=255)                   aaCGAGTCGGCGCGGGTCAGCCAGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGcc                                                                                                                                   <  4:10945/149‑1 (MQ=255)                    aCGAGTCGGCGCGGGTCAGCCAGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGcc                                                                                                                                   >  1:231019/1‑148 (MQ=255)                              gcgGGTCAGCCAGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGc                                                                                                                         >  8:162824/1‑148 (MQ=255)                                gggTCAGCCAGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAa                                                                                                                      <  1:41064‑M2/149‑2 (MQ=255)                                     aGCCAGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAacgacg                                                                                                                 >  6:307039‑M2/1‑143 (MQ=255)                                       ccAGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAacgacgag                                                                                                               <  7:187970‑M2/149‑9 (MQ=255)                                        cAGTCGCTGAACAGCCTGGCCAACCAGCGGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAacgactagg                                                                                                              <  7:201716‑M2/149‑10 (MQ=255)                                        cAGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAacgacgagg                                                                                                              >  2:41064‑M2/1‑140 (MQ=255)                                         aGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTtcgccacaccttggcagtggggcaagtgtagacgacgaggt                                                                                                             <  4:162646‑M1/149‑42 (MQ=255)                                                    aGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGaa                                                                                                    >  5:119983/1‑147 (MQ=255)                                                     gCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAagag                                                                                                 >  1:2637/1‑149 (MQ=255)                                                        tGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTtcgccacacctcggcagtggggcaagtgtagacgacgaggttttgt                                                                                                        <  5:294997‑M1/139‑47 (MQ=255)                                                        tGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTtcgccacacctcggcagtggggcaagtgtagacgacgaggttttgt                                                                                                        >  6:294997‑M1/1‑93 (MQ=255)                                                        tGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCAt                                                                                              >  8:202331/1‑149 (MQ=255)                                                          gCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCAttt                                                                                            <  2:231019/149‑1 (MQ=255)                                                               ccAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACg                                                                                       <  6:119983/149‑1 (MQ=255)                                                               ccAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACg                                                                                       >  1:83483/1‑149 (MQ=255)                                                                cagcagCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACgc                                                                                      >  6:249989/1‑149 (MQ=255)                                                                 agcagcAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACgct                                                                                     <  7:162824/149‑1 (MQ=255)                                                                   cagcaAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCaa                                                                                         <  2:245639/143‑1 (MQ=255)                                                                   cagcaAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGGGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCaa                                                                                         >  1:245639/1‑143 (MQ=255)                                                                      caAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAacgacg                                                                                                                 <  3:82673‑M2/116‑7 (MQ=255)                                                                      caAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAacgacg                                                                                                                 >  4:82673‑M2/1‑110 (MQ=255)                                                                      caAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTgg                                                                                >  6:18258/1‑149 (MQ=255)                                                                      caAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTgg                                                                                <  8:262634/149‑1 (MQ=255)                                                                           gcTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCggg                                                                           <  5:249989/149‑1 (MQ=255)                                                                               aTGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACg                                                                                       >  7:169233/1‑133 (MQ=255)                                                                               aTGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACg                                                                                       <  8:169233/133‑1 (MQ=255)                                                                               aTGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGgctgc                                                                       <  2:176640/149‑1 (MQ=255)                                                                                 ggACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGctgctg                                                                     >  8:63206/1‑149 (MQ=255)                                                                                  gACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGt                                                                    >  1:218660/1‑149 (MQ=255)                                                                                     cAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGa                                                                 >  4:153872/1‑149 (MQ=255)                                                                                        ttCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGctgctg                                                                     <  7:226700/142‑1 (MQ=255)                                                                                        ttCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGctgctg                                                                     >  8:226700/1‑142 (MQ=255)                                                                                          ccGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACgctgct                                                                                  <  8:276070/127‑1 (MQ=255)                                                                                          ccGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACgctgct                                                                                  >  7:276070/1‑127 (MQ=255)                                                                                           cgcgTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTg                                                            <  3:43900/148‑1 (MQ=255)                                                                                                  gAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTgg                                                                                <  1:149708/121‑1 (MQ=255)                                                                                                  gAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTgg                                                                                >  2:149708/1‑121 (MQ=255)                                                                                                   aaGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTg                                                      <  2:218660/146‑1 (MQ=255)                                                                                                   aaGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGcc                                                   <  7:174882/149‑1 (MQ=255)                                                                                                   aaGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGcc                                                   >  6:99139/1‑149 (MQ=255)                                                                                                        aaCGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCAc                                              >  5:209627/1‑149 (MQ=255)                                                                                                         aCGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCAcc                                             <  8:187970/149‑1 (MQ=255)                                                                                                            gggCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGAc                                          <  8:201716/149‑1 (MQ=255)                                                                                                                 aCGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAgcgc                                     >  5:163257/1‑149 (MQ=255)                                                                                                                 aCGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAgcgc                                     >  2:206692/1‑149 (MQ=255)                                                                                                                  cGCCAGTGGCCCTGAAACTGACGAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGcgcc                                    >  7:201632/1‑149 (MQ=255)                                                                                                                  cGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAgcgc                                     <  3:20326/148‑1 (MQ=255)                                                                                                                  cGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAgcgc                                     >  4:20326/1‑148 (MQ=255)                                                                                                                  cGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGcgcc                                    <  4:306623/149‑1 (MQ=255)                                                                                                                           cccTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCgg                             >  1:297306/1‑147 (MQ=255)                                                                                                                                aaaCTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGAc                                          <  6:323346/129‑1 (MQ=255)                                                                                                                                aaaCTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGAc                                          >  5:323346/1‑129 (MQ=255)                                                                                                                                     gACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCGGCAGAGCAACCTg                 >  5:156846/1‑149 (MQ=255)                                                                                                                                      aCAAAACCTCGTCGTCTACACTTGCCCCACTGCCGAGGTGTGGCGAacgacgaggttttgtcagtttcagggccactggcgtggccccgttcgcttcagacgcggaactggtccatcagcgcttgctgctggttggcca                          >  6:294997‑M2/1‑46 (MQ=255)                                                                                                                                      aCAAAACCTCGTCGTCTACACTTGCCCCACTGCCGAGGTGTGGCGAacgacgaggttttgtcagtttcagggccactggcgtggccccgttcgcttcagacgcggaactggtccatcagcgcttgctgctggttggcca                          <  5:294997‑M2/139‑94 (MQ=255)                                                                                                                                           aCCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAacgacgaggttttgtcagtttcagggccactggcgtggccccgttcgcttcagacgcggaactggtccatcagcgcttgctgctggttggccaggctgttcagcgact           <  4:162646‑M2/149‑109 (MQ=255)                                                                                                                                            ccTCGTCGTtcgccacaccttggcagtggggcaagtgtagacgacgaggttttgtcagtttcagggccactggcgtggccccgttcgcttcagacgcggaactggtccatcagcgcttgctgctggttggccaggctgttcagcgactg          >  2:41064‑M1/1‑9 (MQ=255)                                                                                                                                            ccTAGTCGTtcgccacaccttggcagtggggcaagtgtagacgacgaggttttgtcagtttcagggccactggcgtggccccgttcgcttcagacgcggaactggtccatcagcgcttgccgctggttggccaggctgttcagcgactg          <  7:201716‑M1/149‑141 (MQ=255)                                                                                                                                             cTCGTCGTtcgccacaccttggcagtggggcaagtgtagacgacgaggttttgtcagtttcagggccactggcgtggccccgttcgcttcagacgcggaactggtccatcagcgcttgctgctggttggccaggctgttcagcgactgg         <  7:187970‑M1/149‑142 (MQ=255)                                                                                                                                              tcgtcgTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGt                                                                    <  2:175339/89‑1 (MQ=255)                                                                                                                                              tcgtcgTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGt                                                                    >  1:175339/1‑89 (MQ=255)                                                                                                                                               cgtcgttcgccacaccttggcagtggggcaagtgtagacgacgaggttttgtcagtttcagggccactggcgtggccccgttcgcttcagacgcggaactggtccatcagcgcttgctgctggttggccaggctgttcagcgactggct       >  6:307039‑M1/1‑6 (MQ=255)                                                                                                                                               cgtcgttcgccacaccttggcagtggggcaagtgtagacgacgaggttttgtcagtttcagggccactggcgtggccccgttcgcttcagacgcggaactggtccatcagcgcttg                                        >  4:82673‑M1/1‑6 (MQ=255)                                                                                                                                               cgtcgttcgccacaccttggcagtggggcaagtgtagacgacgaggttttgtcagtttcagggccactggcgtggccccgttcgcttcagacgcggaactggtccatcagcgcttg                                        <  3:82673‑M1/116‑111 (MQ=255)                                                                                                                                                gtcgtcTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCGGCAGAGCAACCTGCGCCTATcc        <  5:18258/147‑1 (MQ=255)                                                                                                                                                    ttcgccacaccttggcagtggggcaagtgtagacgacgaggttttgtcagtttcagggccactggcgtggccccgttcgcttcagacgcggaactggtccatcagcgcttgctgctggttggccaggctgttcagcgactggctgaccc  <  1:41064‑M1/149‑149 (MQ=255)                                                                                                                                                    tcTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCGGCAGAGCAACCTGCGCCTATCCATTTTg  <  2:83483/149‑1 (MQ=255)                                                                                                                                                    tcTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCGGCAGAGCAACCTGCGCCTATCCATTTTg  <  2:2637/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     TCCCTGTCTGGCCAGGCCAACGAGTCGGCGCGGGTCAGCCAGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCGGCAGAGCAACCTGCGCCTATCCATTTTG  >  NC_002947/4036996‑4037291

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.