New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4037143	51 (1.010)	3 (0.070)	3/234	NT	5.7%	intergenic (+49/‑46)	PP_3557/PP_3558	methyl‑accepting chemotaxis transducer/amino acid ABC transporter substrate‑binding protein
	?	NC_002947	= 4037174	53 (1.160)					intergenic (+80/‑15)	PP_3557/PP_3558	methyl‑accepting chemotaxis transducer/amino acid ABC transporter substrate‑binding protein

GGGTCAGCCAGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCGGCAGAGCAACCTGCGCCTATCCATTTTGGTGCCATCGGCTGGGAAAGCGGCGCCCTCAC  >  NC_002947/4037027‑4037322                                                                                                                                                    |                                                                                                                                                     gggTCAGCCAGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAa                                                                                                                                                     <  1:41064‑M2/149‑2 (MQ=255)      aGCCAGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAacgacg                                                                                                                                                >  6:307039‑M2/1‑143 (MQ=255)        ccAGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAacgacgag                                                                                                                                              <  7:187970‑M2/149‑9 (MQ=255)         cAGTCGCTGAACAGCCTGGCCAACCAGCGGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAacgactagg                                                                                                                                             <  7:201716‑M2/149‑10 (MQ=255)         cAGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAacgacgagg                                                                                                                                             >  2:41064‑M2/1‑140 (MQ=255)                     aGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGaa                                                                                                                                   >  5:119983/1‑147 (MQ=255)                      gCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAagag                                                                                                                                >  1:2637/1‑149 (MQ=255)                         tGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCAt                                                                                                                             >  8:202331/1‑149 (MQ=255)                           gCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCAttt                                                                                                                           <  2:231019/149‑1 (MQ=255)                                ccAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACg                                                                                                                      <  6:119983/149‑1 (MQ=255)                                ccAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACg                                                                                                                      >  1:83483/1‑149 (MQ=255)                                 cagcagCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACgc                                                                                                                     >  6:249989/1‑149 (MQ=255)                                  agcagcAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACgct                                                                                                                    <  7:162824/149‑1 (MQ=255)                                    cagcaAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCaa                                                                                                                        <  2:245639/143‑1 (MQ=255)                                    cagcaAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGGGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCaa                                                                                                                        >  1:245639/1‑143 (MQ=255)                                       caAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAacgacg                                                                                                                                                >  4:82673‑M2/1‑110 (MQ=255)                                       caAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAacgacg                                                                                                                                                <  3:82673‑M2/116‑7 (MQ=255)                                       caAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTgg                                                                                                               <  8:262634/149‑1 (MQ=255)                                       caAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTgg                                                                                                               >  6:18258/1‑149 (MQ=255)                                            gcTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCggg                                                                                                          <  5:249989/149‑1 (MQ=255)                                                aTGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACg                                                                                                                      <  8:169233/133‑1 (MQ=255)                                                aTGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACg                                                                                                                      >  7:169233/1‑133 (MQ=255)                                                aTGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGgctgc                                                                                                      <  2:176640/149‑1 (MQ=255)                                                  ggACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGctgctg                                                                                                    >  8:63206/1‑149 (MQ=255)                                                   gACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGt                                                                                                   >  1:218660/1‑149 (MQ=255)                                                      cAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGa                                                                                                >  4:153872/1‑149 (MQ=255)                                                         ttCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGctgctg                                                                                                    <  7:226700/142‑1 (MQ=255)                                                         ttCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGctgctg                                                                                                    >  8:226700/1‑142 (MQ=255)                                                           ccGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACgctgct                                                                                                                 >  7:276070/1‑127 (MQ=255)                                                           ccGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACgctgct                                                                                                                 <  8:276070/127‑1 (MQ=255)                                                            cgcgTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTg                                                                                           <  3:43900/148‑1 (MQ=255)                                                                   gAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTgg                                                                                                               >  2:149708/1‑121 (MQ=255)                                                                   gAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTgg                                                                                                               <  1:149708/121‑1 (MQ=255)                                                                    aaGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTg                                                                                     <  2:218660/146‑1 (MQ=255)                                                                    aaGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGcc                                                                                  <  7:174882/149‑1 (MQ=255)                                                                    aaGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGcc                                                                                  >  6:99139/1‑149 (MQ=255)                                                                         aaCGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCAc                                                                             >  5:209627/1‑149 (MQ=255)                                                                          aCGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCAcc                                                                            <  8:187970/149‑1 (MQ=255)                                                                             gggCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGAc                                                                         <  8:201716/149‑1 (MQ=255)                                                                                  aCGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAgcgc                                                                    >  2:206692/1‑149 (MQ=255)                                                                                  aCGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAgcgc                                                                    >  5:163257/1‑149 (MQ=255)                                                                                   cGCCAGTGGCCCTGAAACTGACGAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGcgcc                                                                   >  7:201632/1‑149 (MQ=255)                                                                                   cGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAgcgc                                                                    <  3:20326/148‑1 (MQ=255)                                                                                   cGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAgcgc                                                                    >  4:20326/1‑148 (MQ=255)                                                                                   cGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGcgcc                                                                   <  4:306623/149‑1 (MQ=255)                                                                                            cccTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCgg                                                            >  1:297306/1‑147 (MQ=255)                                                                                                 aaaCTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGAc                                                                         >  5:323346/1‑129 (MQ=255)                                                                                                 aaaCTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGAc                                                                         <  6:323346/129‑1 (MQ=255)                                                                                                      gACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCGGCAGAGCAACCTg                                                >  5:156846/1‑149 (MQ=255)                                                                                                       aCAAAACCTCGTCGTCTACACTTGCCCCACTGCCGAGGTGTGGCGAacgacgaggttttgtcagtttcagggccactggcgtggccccgttcgcttcagacgcggaactggtccatcagcgcttgctgctggttggcca                                                         <  5:294997‑M2/139‑94 (MQ=255)                                                                                                       aCAAAACCTCGTCGTCTACACTTGCCCCACTGCCGAGGTGTGGCGAacgacgaggttttgtcagtttcagggccactggcgtggccccgttcgcttcagacgcggaactggtccatcagcgcttgctgctggttggcca                                                         >  6:294997‑M2/1‑46 (MQ=255)                                                                                                            aCCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAacgacgaggttttgtcagtttcagggccactggcgtggccccgttcgcttcagacgcggaactggtccatcagcgcttgctgctggttggccaggctgttcagcgact                                          <  4:162646‑M2/149‑109 (MQ=255)                                                                                                               tcgtcgTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGt                                                                                                   <  2:175339/89‑1 (MQ=255)                                                                                                               tcgtcgTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGt                                                                                                   >  1:175339/1‑89 (MQ=255)                                                                                                                 gtcgtcTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCGGCAGAGCAACCTGCGCCTATcc                                       <  5:18258/147‑1 (MQ=255)                                                                                                                     tcTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCGGCAGAGCAACCTGCGCCTATCCATTTTg                                 <  2:83483/149‑1 (MQ=255)                                                                                                                     tcTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCGGCAGAGCAACCTGCGCCTATCCATTTTg                                 <  2:2637/149‑1 (MQ=255)                                                                                                                                cccACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCGGCAGAGCAAc                                                   <  4:173469/120‑1 (MQ=255)                                                                                                                                cccACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCGGCAGAGCAAc                                                   >  3:173469/1‑120 (MQ=255)                                                                                                                                     tGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCGGCAGAGCAACCTGCGCCTATCCATTTTGGTGCCATCGGCTggg                  >  6:50821/1‑148 (MQ=255)                                                                                                                                             tgtgGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCGGCAGAGCAACCTGCGCCTATCCATTTTGGTGCCATCGGCTGGGAAAgcggcg         <  7:63206/149‑1 (MQ=255)                                                                                                                                              gtgGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCGGCAGAGCAACCTGCGCCTATCCATTTTGGTGCCATCGGCTGGGAAAGCGgcgc        >  4:231926/1‑149 (MQ=255)                                                                                                                                               tgGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCGGCAGAGCAACCTGCGCCTATCCATTTTGGTGCCATCGGCTGGGAAAGCGGCGcc       <  6:209627/149‑1 (MQ=255)                                                                                                                                                   gAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCGGCAGAGCAACCTgcgc                                             <  6:218351/107‑1 (MQ=255)                                                                                                                                                   gAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCGGCAGAGCAACCTgcgc                                             >  5:218351/1‑107 (MQ=255)                                                                                                                                                    aaCGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCGGCAGAGCAACCTGCGCCTATCCATTTTGGTGCCATCGGCTGGGAAAGCGGCGCCCTcac  <  6:156846/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     GGGTCAGCCAGTCGCTGAACAGCCTGGCCAACCAGCAGCAAGCGCTGATGGACCAGTTCCGCGTCTGAAGCGAACGGGGCCACGCCAGTGGCCCTGAAACTGACAAAACCTCGTCGTCTACACTTGCCCCACTGCCAAGGTGTGGCGAACGACGAGGTTTACATGAAGAGCATTTCAACGCTGCTGGCCGGGCTGCTGTTGACGGTGGGTTTGGCCAGCACCGACAGCGCCGCATCGGCAGAGCAACCTGCGCCTATCCATTTTGGTGCCATCGGCTGGGAAAGCGGCGCCCTCAC  >  NC_002947/4037027‑4037322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.