New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4139337 =	45 (0.890)	5 (0.100)	4/248	NT	11.1%	coding (270/1041 nt)	PP_3644	monooxygenase subunit
	?	NC_002947	4139373 =	37 (0.760)					coding (306/1041 nt)	PP_3644	monooxygenase subunit

GGATCGGTGAACACCACGCCATGGAATACACCATTTCGCCAAGCCCGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGTGCCGGTGGTGC  >  NC_002947/4139189‑4139482                                                                                                                                                     |                                                                                                                                                   ttcaccgtcgtgggcgtagtcgccttcccacagcttgcgcaccaccggcaccatctcgcgcagcgccttgccgccgtcggtggccggcatgccacctgccatgcggtcgaactcgaactggtaggcaccgcgggccaggcccacttcca                                                                                                                                                    <  5:329944‑M1/1‑1 (MQ=255) ggATCGGTGAACACCACGCCATGGAATACACCATTTCGCCAAGCCCGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGaa                                                                                                                                                    >  8:139930/1‑149 (MQ=255)  gATCGGTGAACACCACGCCATGGAATACACCATTTCGCCAAGCCCGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGaa                                                                                                                                                    <  7:139930/148‑1 (MQ=255)   caccgtcgtgggcgtagtcgccttcccacagcttgcgcaccaccggcaccatctcgcgcagcgccttgccgccgtcggtggccggcatgccacctgccatgcggtcgaactcgaactggtaggcaccgcgggccaggcccacttccATg                                                                                                                                                  <  4:287228‑M1/3‑1 (MQ=255)    tCGGTGAACACCACGCCATGGAATACACCATTTCGCCAAGCCCGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATgc                                                                                                                                                 <  6:333013/149‑1 (MQ=255)      ggTGAACACCACGCCATGGAATACACCATTTCGCCAAGCCCGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATgcgc                                                                                                                                               >  2:218154/1‑149 (MQ=255)      ggTGAACACCACGCCATGGAATACACCATTTCGCCAAGCCCGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATgcg                                                                                                                                                <  3:184825/148‑1 (MQ=255)       gTGAACACCACGCCATGGAATACACCATTTCGCCAAGCCCGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGcc                                                                                                                                              >  6:69027/1‑149 (MQ=255)              ccacGCCATGGAATACACCATTTCGCCAAGCCCGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGCACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCg                                                                                                                                       >  7:146155/1‑149 (MQ=255)                    cATGGAATACACCATTTCGCCAAGCCCGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGa                                                                                                                                 >  4:280637/1‑149 (MQ=255)                      tGGAATACACCATTTCGCCAAGCCCGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGAt                                                                                                                                >  8:46602/1‑148 (MQ=255)                        gAATACACCATTTCGCCAAGCCCGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAg                                                                                                                             >  7:134755/1‑149 (MQ=255)                         aaTACACCATTTCGCCAAGCCCGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCa                                                                                                                              >  4:233640/1‑147 (MQ=255)                         aaTACACCATTTCGCCAAGCCCGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCa                                                                                                                              <  3:233640/147‑1 (MQ=255)                         aaTACACCATTTCGCCAAGCCCGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAg                                                                                                                             >  2:266156/1‑148 (MQ=255)                                 aTTTCGCCAAGCCCGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCg                                                                                                                    >  2:80089/1‑149 (MQ=255)                                  tttCGCCAAGCCCGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGc                                                                                                                   <  8:134755/149‑1 (MQ=255)                                  tttCGCCAAGCCCGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGc                                                                                                                   <  8:172175/149‑1 (MQ=255)                                     gcgcaccaccggcaccatctcgcgcagcgccttgccgccgtcggtggccggcatgccacctgccatgcggtcgaactcgaactggtaggcaccgcgggccaggcccacttccATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCAt                                                                                                                 >  6:329944‑M1/113‑148 (MQ=255)                                              cGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACgg                                                                                                                       >  7:260740/1‑133 (MQ=255)                                              cGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACgg                                                                                                                       <  8:260740/133‑1 (MQ=255)                                              cGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGc                                                                                                       <  8:84180/149‑1 (MQ=255)                                                    cGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGcc                                                                                                 >  2:107234/1‑149 (MQ=255)                                                      tctcgcgcagcgccttgccgccgtcggtggccggcatgccacctgccatgcggtcgaactcgaactggtaggcaccgcgggccaggcccacttccATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCAt                                                                                                                 >  4:200830‑M1/96‑131 (MQ=255)                                                      tctcgcgcagcgccttgccgccgtcggtggccggcatgccacctgccatgcggtcgaactcgaactggtaggcaccgcgggccaggcccacttccATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCAt                                                                                                                 <  3:200830‑M1/36‑1 (MQ=255)                                                      ctgctgGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCcg                                                                                               <  4:144738/149‑1 (MQ=255)                                                            gCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGcc                                                                                                 >  7:192137/1‑141 (MQ=255)                                                            gCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGcc                                                                                                 <  8:192137/141‑1 (MQ=255)                                                            gCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTg                                                                                          <  2:185398/148‑1 (MQ=255)                                                            gCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGc                                                                                         >  7:289459/1‑149 (MQ=255)                                                             ccTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGcc                                                                                        <  5:69027/149‑1 (MQ=255)                                                                aCCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATc                                                                                                                               >  8:20918/1‑107 (MQ=255)                                                                aCCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATc                                                                                                                               <  7:20918/107‑1 (MQ=255)                                                                  cTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCa                                                                                   <  1:266156/149‑1 (MQ=255)                                                                        gcgcgcACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGTCTGGCCCGCGGTGCCTACCag‑ttcga                                                                            <  3:280637/149‑1 (MQ=255)                                                                         gccgtcggtggccggcatgccacctgccattcggtcgaactcgaactggtaggcaccgcgggccaggcccacttccATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCa                                                                                                                  >  6:143468‑M1/77‑111 (MQ=255)                                                                         gccgtcggtggccggcatgccacctgccatgcggtcgaactcgaactggtaggcaccgcgggccaggcccacttccATGCGCCCTGCTCGACGTGATCAGCACCGGCCGCa                                                                                                                  <  5:143468‑M1/35‑1 (MQ=255)                                                                                  agaagaTCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCg                                                                   >  3:23311/1‑148 (MQ=255)                                                                                        tCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATgg                                                              >  6:177454/1‑147 (MQ=255)                                                                                        tCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCa                                                            <  7:46602/149‑1 (MQ=255)                                                                                          cGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAg                                                           <  1:218154/148‑1 (MQ=255)                                                                                               gggCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCa                                                     >  3:56046/1‑149 (MQ=255)                                                                                                   gcCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGcc                                                 >  5:79106/1‑149 (MQ=255)                                                                                                         aCCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCAc                                           >  8:182108/1‑149 (MQ=255)                                                                                                            atcatTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGa                                        >  5:296663/1‑149 (MQ=255)                                                                                                               atTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGAcgg                                     <  1:107234/149‑1 (MQ=255)                                                                                                                tggctccGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGAcggc                                    <  8:146155/144‑1 (MQ=255)                                                                                                                     ccGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCaa                               <  6:79106/149‑1 (MQ=255)                                                                                                                      cGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAg                              <  8:15989/149‑1 (MQ=255)                                                                                                                       gTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAGTTTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAg                              <  1:80089/149‑1 (MQ=255)                                                                                                                             gAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTgc                       <  6:296663/149‑1 (MQ=255)                                                                                                                                     tCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATg               >  3:287228/1‑149 (MQ=255)                                                                                                                                       cgcgTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGt             <  5:177454/149‑1 (MQ=255)                                                                                                                                        gcgTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCTGGCCACCGACGGCGGCAAGgc                            >  8:86673/1‑133 (MQ=255)                                                                                                                                        gcgTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCTGGCCACCGACGGCGGCAAGgc                            <  7:86673/133‑1 (MQ=255)                                                                                                                                               tGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGTGCCggtgg     >  2:120070/1‑149 (MQ=255)                                                                                                                                                  cGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGTGCCGGTGGTgc  <  1:120070/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GGATCGGTGAACACCACGCCATGGAATACACCATTTCGCCAAGCCCGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGTGCCGGTGGTGC  >  NC_002947/4139189‑4139482

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.